public class ObjectFactory extends Object
An ObjectFactory allows you to programatically construct new instances of the Java representation for XML content. The Java representation of XML content can consist of schema derived interfaces and classes representing the binding of schema type definitions, element declarations and model groups. Factory methods for each of these are provided in this class.
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ObjectFactory()
Create a new ObjectFactory that can be used to create new instances of schema derived classes for package: umich.ms.fileio.filetypes.mzidentml.jaxb.standard
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public ObjectFactory()
public MzIdentMLType createMzIdentMLType()
MzIdentMLTypepublic CVListType createCVListType()
CVListTypepublic AnalysisSoftwareListType createAnalysisSoftwareListType()
AnalysisSoftwareListTypepublic AnalysisSampleCollectionType createAnalysisSampleCollectionType()
AnalysisSampleCollectionTypepublic SequenceCollectionType createSequenceCollectionType()
SequenceCollectionTypepublic AnalysisCollectionType createAnalysisCollectionType()
AnalysisCollectionTypepublic AnalysisProtocolCollectionType createAnalysisProtocolCollectionType()
AnalysisProtocolCollectionTypepublic InputsType createInputsType()
InputsTypepublic AnalysisDataType createAnalysisDataType()
AnalysisDataTypepublic DataCollectionType createDataCollectionType()
DataCollectionTypepublic SearchDatabaseType createSearchDatabaseType()
SearchDatabaseTypepublic SourceFileType createSourceFileType()
SourceFileTypepublic ModificationParamsType createModificationParamsType()
ModificationParamsTypepublic FilterType createFilterType()
FilterTypepublic DatabaseFiltersType createDatabaseFiltersType()
DatabaseFiltersTypepublic TranslationTableType createTranslationTableType()
TranslationTableTypepublic DatabaseTranslationType createDatabaseTranslationType()
DatabaseTranslationTypepublic SpectrumIdentificationProtocolType createSpectrumIdentificationProtocolType()
SpectrumIdentificationProtocolTypepublic InputSpectraType createInputSpectraType()
InputSpectraTypepublic SearchDatabaseRefType createSearchDatabaseRefType()
SearchDatabaseRefTypepublic SpectrumIdentificationType createSpectrumIdentificationType()
SpectrumIdentificationTypepublic MeasureType createMeasureType()
MeasureTypepublic FragmentationTableType createFragmentationTableType()
FragmentationTableTypepublic SpectrumIdentificationListType createSpectrumIdentificationListType()
SpectrumIdentificationListTypepublic SpecificityRulesType createSpecificityRulesType()
SpecificityRulesTypepublic SearchModificationType createSearchModificationType()
SearchModificationTypepublic FragmentArrayType createFragmentArrayType()
FragmentArrayTypepublic IonTypeType createIonTypeType()
IonTypeTypepublic FragmentationType createFragmentationType()
FragmentationTypepublic PeptideEvidenceRefType createPeptideEvidenceRefType()
PeptideEvidenceRefTypepublic SpectrumIdentificationItemType createSpectrumIdentificationItemType()
SpectrumIdentificationItemTypepublic SpectrumIdentificationResultType createSpectrumIdentificationResultType()
SpectrumIdentificationResultTypepublic InputSpectrumIdentificationsType createInputSpectrumIdentificationsType()
InputSpectrumIdentificationsTypepublic ProteinDetectionType createProteinDetectionType()
ProteinDetectionTypepublic ProteinDetectionProtocolType createProteinDetectionProtocolType()
ProteinDetectionProtocolTypepublic ProteinDetectionListType createProteinDetectionListType()
ProteinDetectionListTypepublic SpectrumIdentificationItemRefType createSpectrumIdentificationItemRefType()
SpectrumIdentificationItemRefTypepublic PeptideHypothesisType createPeptideHypothesisType()
PeptideHypothesisTypepublic ProteinDetectionHypothesisType createProteinDetectionHypothesisType()
ProteinDetectionHypothesisTypepublic ProteinAmbiguityGroupType createProteinAmbiguityGroupType()
ProteinAmbiguityGroupTypepublic ModificationType createModificationType()
ModificationTypepublic PeptideType createPeptideType()
PeptideTypepublic SubstitutionModificationType createSubstitutionModificationType()
SubstitutionModificationTypepublic SpectraDataType createSpectraDataType()
SpectraDataTypepublic AnalysisSoftwareType createAnalysisSoftwareType()
AnalysisSoftwareTypepublic EnzymeType createEnzymeType()
EnzymeTypepublic EnzymesType createEnzymesType()
EnzymesTypepublic ResidueType createResidueType()
ResidueTypepublic AmbiguousResidueType createAmbiguousResidueType()
AmbiguousResidueTypepublic MassTableType createMassTableType()
MassTableTypepublic PeptideEvidenceType createPeptideEvidenceType()
PeptideEvidenceTypepublic ToleranceType createToleranceType()
ToleranceTypepublic SpectrumIDFormatType createSpectrumIDFormatType()
SpectrumIDFormatTypepublic DBSequenceType createDBSequenceType()
DBSequenceTypepublic SampleType createSampleType()
SampleTypepublic SubSampleType createSubSampleType()
SubSampleTypepublic ExternalDataType createExternalDataType()
ExternalDataTypepublic FileFormatType createFileFormatType()
FileFormatTypepublic PersonType createPersonType()
PersonTypepublic AffiliationType createAffiliationType()
AffiliationTypepublic OrganizationType createOrganizationType()
OrganizationTypepublic ParentOrganizationType createParentOrganizationType()
ParentOrganizationTypepublic ContactRoleType createContactRoleType()
ContactRoleTypepublic BibliographicReferenceType createBibliographicReferenceType()
BibliographicReferenceTypepublic UserParamType createUserParamType()
UserParamTypepublic CVParamType createCVParamType()
CVParamTypepublic AuditCollectionType createAuditCollectionType()
AuditCollectionTypepublic ProviderType createProviderType()
ProviderTypepublic ParamListType createParamListType()
ParamListTypepublic JAXBElement<MzIdentMLType> createMzIdentML(MzIdentMLType value)
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