public class ObjectFactory extends Object
An ObjectFactory allows you to programatically construct new instances of the Java representation for XML content. The Java representation of XML content can consist of schema derived interfaces and classes representing the binding of schema type definitions, element declarations and model groups. Factory methods for each of these are provided in this class.
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ObjectFactory()
Create a new ObjectFactory that can be used to create new instances of schema derived classes for package: umich.ms.fileio.filetypes.pepxml.jaxb.nested
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public ObjectFactory()
public PeptideprophetResult createPeptideprophetResult()
PeptideprophetResultpublic LibraResult createLibraResult()
LibraResultpublic MsmsPipelineAnalysis createMsmsPipelineAnalysis()
MsmsPipelineAnalysispublic LibraSummary createLibraSummary()
LibraSummarypublic PeptideprophetSummary createPeptideprophetSummary()
PeptideprophetSummarypublic InterprophetResult createInterprophetResult()
InterprophetResultpublic PeptideprophetSummary.MixtureModelling createPeptideprophetSummaryMixtureModelling()
PeptideprophetSummary.MixtureModellingpublic PeptideprophetSummary.MixtureModelling.Mixturemodel createPeptideprophetSummaryMixtureModellingMixturemodel()
PeptideprophetSummary.MixtureModelling.Mixturemodelpublic PeptideprophetSummary.MixtureModelling.MixturemodelDistribution createPeptideprophetSummaryMixtureModellingMixturemodelDistribution()
PeptideprophetSummary.MixtureModelling.MixturemodelDistributionpublic LibraSummary.IsotopicContributions createLibraSummaryIsotopicContributions()
LibraSummary.IsotopicContributionspublic LibraSummary.IsotopicContributions.ContributingChannel createLibraSummaryIsotopicContributionsContributingChannel()
LibraSummary.IsotopicContributions.ContributingChannelpublic MsmsPipelineAnalysis.MsmsRunSummary createMsmsPipelineAnalysisMsmsRunSummary()
MsmsPipelineAnalysis.MsmsRunSummarypublic MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery createMsmsPipelineAnalysisMsmsRunSummarySpectrumQuery()
MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuerypublic MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult createMsmsPipelineAnalysisMsmsRunSummarySpectrumQuerySearchResult()
MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResultpublic MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult.SearchHit createMsmsPipelineAnalysisMsmsRunSummarySpectrumQuerySearchResultSearchHit()
MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult.SearchHitpublic MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult.SearchHit.ModificationInfo createMsmsPipelineAnalysisMsmsRunSummarySpectrumQuerySearchResultSearchHitModificationInfo()
public MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary createMsmsPipelineAnalysisMsmsRunSummarySearchSummary()
MsmsPipelineAnalysis.MsmsRunSummary.SearchSummarypublic MsmsPipelineAnalysis.MsmsRunSummary.SampleEnzyme createMsmsPipelineAnalysisMsmsRunSummarySampleEnzyme()
MsmsPipelineAnalysis.MsmsRunSummary.SampleEnzymepublic MsmsPipelineAnalysis.DatasetDerivation createMsmsPipelineAnalysisDatasetDerivation()
MsmsPipelineAnalysis.DatasetDerivationpublic MixtureModelType createMixtureModelType()
MixtureModelTypepublic RocErrorDataType createRocErrorDataType()
RocErrorDataTypepublic AsapratioLcLightpeak createAsapratioLcLightpeak()
AsapratioLcLightpeakpublic AsapratioLcHeavypeak createAsapratioLcHeavypeak()
AsapratioLcHeavypeakpublic XpressratioTimestamp createXpressratioTimestamp()
XpressratioTimestamppublic PeptideprophetResult.SearchScoreSummary createPeptideprophetResultSearchScoreSummary()
PeptideprophetResult.SearchScoreSummarypublic AsapratioSummary createAsapratioSummary()
AsapratioSummarypublic LibraResult.Intensity createLibraResultIntensity()
LibraResult.Intensitypublic XpressratioResult createXpressratioResult()
XpressratioResultpublic InterprophetSummary createInterprophetSummary()
InterprophetSummarypublic InputFileType createInputFileType()
InputFileTypepublic MsmsPipelineAnalysis.AnalysisSummary createMsmsPipelineAnalysisAnalysisSummary()
MsmsPipelineAnalysis.AnalysisSummarypublic AsapratioContribution createAsapratioContribution()
AsapratioContributionpublic AsapratioTimestamp createAsapratioTimestamp()
AsapratioTimestamppublic InteractSummary createInteractSummary()
InteractSummarypublic LibraSummary.FragmentMasses createLibraSummaryFragmentMasses()
LibraSummary.FragmentMassespublic PeptideprophetSummary.DistributionPoint createPeptideprophetSummaryDistributionPoint()
PeptideprophetSummary.DistributionPointpublic AsapratioPeptideData createAsapratioPeptideData()
AsapratioPeptideDatapublic DatabaseRefreshTimestamp createDatabaseRefreshTimestamp()
DatabaseRefreshTimestamppublic XpressratioSummary createXpressratioSummary()
XpressratioSummarypublic InterprophetResult.SearchScoreSummaryIProphet createInterprophetResultSearchScoreSummaryIProphet()
InterprophetResult.SearchScoreSummaryIProphetpublic AsapratioResult createAsapratioResult()
AsapratioResultpublic NameValueType createNameValueType()
NameValueTypepublic PeptideprophetSummary.MixtureModelling.Mixturemodel.Point createPeptideprophetSummaryMixtureModellingMixturemodelPoint()
PeptideprophetSummary.MixtureModelling.Mixturemodel.Pointpublic PeptideprophetSummary.MixtureModelling.MixturemodelDistribution.PosmodelDistribution createPeptideprophetSummaryMixtureModellingMixturemodelDistributionPosmodelDistribution()
PeptideprophetSummary.MixtureModelling.MixturemodelDistribution.PosmodelDistributionpublic PeptideprophetSummary.MixtureModelling.MixturemodelDistribution.NegmodelDistribution createPeptideprophetSummaryMixtureModellingMixturemodelDistributionNegmodelDistribution()
PeptideprophetSummary.MixtureModelling.MixturemodelDistribution.NegmodelDistributionpublic LibraSummary.IsotopicContributions.ContributingChannel.AffectedChannel createLibraSummaryIsotopicContributionsContributingChannelAffectedChannel()
LibraSummary.IsotopicContributions.ContributingChannel.AffectedChannelpublic MsmsPipelineAnalysis.MsmsRunSummary.AnalysisTimestamp createMsmsPipelineAnalysisMsmsRunSummaryAnalysisTimestamp()
MsmsPipelineAnalysis.MsmsRunSummary.AnalysisTimestamppublic MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult.SearchHit.AlternativeProtein createMsmsPipelineAnalysisMsmsRunSummarySpectrumQuerySearchResultSearchHitAlternativeProtein()
public MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult.SearchHit.AnalysisResult createMsmsPipelineAnalysisMsmsRunSummarySpectrumQuerySearchResultSearchHitAnalysisResult()
MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult.SearchHit.AnalysisResultpublic MsmsPipelineAnalysis.MsmsRunSummary.SpectrumQuery.SearchResult.SearchHit.ModificationInfo.ModAminoacidMass createMsmsPipelineAnalysisMsmsRunSummarySpectrumQuerySearchResultSearchHitModificationInfoModAminoacidMass()
public MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.SearchDatabase createMsmsPipelineAnalysisMsmsRunSummarySearchSummarySearchDatabase()
MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.SearchDatabasepublic MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.EnzymaticSearchConstraint createMsmsPipelineAnalysisMsmsRunSummarySearchSummaryEnzymaticSearchConstraint()
MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.EnzymaticSearchConstraintpublic MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.SequenceSearchConstraint createMsmsPipelineAnalysisMsmsRunSummarySearchSummarySequenceSearchConstraint()
MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.SequenceSearchConstraintpublic MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.AminoacidModification createMsmsPipelineAnalysisMsmsRunSummarySearchSummaryAminoacidModification()
MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.AminoacidModificationpublic MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.TerminalModification createMsmsPipelineAnalysisMsmsRunSummarySearchSummaryTerminalModification()
MsmsPipelineAnalysis.MsmsRunSummary.SearchSummary.TerminalModificationpublic MsmsPipelineAnalysis.MsmsRunSummary.SampleEnzyme.Specificity createMsmsPipelineAnalysisMsmsRunSummarySampleEnzymeSpecificity()
MsmsPipelineAnalysis.MsmsRunSummary.SampleEnzyme.Specificitypublic MsmsPipelineAnalysis.DatasetDerivation.DataFilter createMsmsPipelineAnalysisDatasetDerivationDataFilter()
MsmsPipelineAnalysis.DatasetDerivation.DataFilterpublic MixtureModelType.MixtureModelPoint createMixtureModelTypeMixtureModelPoint()
MixtureModelType.MixtureModelPointpublic RocErrorDataType.RocDataPoint createRocErrorDataTypeRocDataPoint()
RocErrorDataType.RocDataPointpublic RocErrorDataType.ErrorPoint createRocErrorDataTypeErrorPoint()
RocErrorDataType.ErrorPointCopyright © 2017. All rights reserved.