public class ProteinSummaryHeader extends Object
Java class for anonymous complex type.
The following schema fragment specifies the expected content contained within this class.
<complexType>
<complexContent>
<restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
<sequence>
<element name="program_details">
<complexType>
<complexContent>
<restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
<sequence>
<any processContents='lax' minOccurs="0"/>
</sequence>
<attribute name="analysis" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
<attribute name="time" use="required" type="{http://www.w3.org/2001/XMLSchema}dateTime" />
<attribute name="version" type="{http://www.w3.org/2001/XMLSchema}string" />
</restriction>
</complexContent>
</complexType>
</element>
</sequence>
<attribute name="reference_database" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
<attribute name="win-cyg_reference_database" type="{http://www.w3.org/2001/XMLSchema}string" />
<attribute name="residue_substitution_list" type="{http://www.w3.org/2001/XMLSchema}string" />
<attribute name="organism" type="{http://www.w3.org/2001/XMLSchema}string" />
<attribute name="source_files" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
<attribute name="source_files_alt" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
<attribute name="win-cyg_source_files" type="{http://www.w3.org/2001/XMLSchema}string" />
<attribute name="source_file_xtn" type="{http://www.w3.org/2001/XMLSchema}string" />
<attribute name="min_peptide_probability" use="required" type="{http://www.w3.org/2001/XMLSchema}double" />
<attribute name="min_peptide_weight" use="required" type="{http://www.w3.org/2001/XMLSchema}double" />
<attribute name="num_predicted_correct_prots" use="required" type="{http://www.w3.org/2001/XMLSchema}double" />
<attribute name="num_input_1_spectra" use="required" type="{http://www.w3.org/2001/XMLSchema}integer" />
<attribute name="num_input_2_spectra" use="required" type="{http://www.w3.org/2001/XMLSchema}integer" />
<attribute name="num_input_3_spectra" use="required" type="{http://www.w3.org/2001/XMLSchema}integer" />
<attribute name="num_input_4_spectra" use="required" type="{http://www.w3.org/2001/XMLSchema}integer" />
<attribute name="num_input_5_spectra" use="required" type="{http://www.w3.org/2001/XMLSchema}integer" />
<attribute name="initial_min_peptide_prob" use="required" type="{http://www.w3.org/2001/XMLSchema}double" />
<attribute name="total_no_spectrum_ids" type="{http://www.w3.org/2001/XMLSchema}double" />
<attribute name="sample_enzyme" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
</restriction>
</complexContent>
</complexType>
| Modifier and Type | Field and Description |
|---|---|
protected double |
initialMinPeptideProb |
protected double |
minPeptideProbability |
protected double |
minPeptideWeight |
protected Integer |
numInput1Spectra |
protected Integer |
numInput2Spectra |
protected Integer |
numInput3Spectra |
protected Integer |
numInput4Spectra |
protected Integer |
numInput5Spectra |
protected double |
numPredictedCorrectProts |
protected String |
organism |
protected ProgramDetails |
programDetails |
protected String |
referenceDatabase |
protected String |
residueSubstitutionList |
protected String |
sampleEnzyme |
protected String |
sourceFiles |
protected String |
sourceFilesAlt |
protected String |
sourceFileXtn |
protected Double |
totalNoSpectrumIds |
protected String |
winCygReferenceDatabase |
protected String |
winCygSourceFiles |
| Constructor and Description |
|---|
ProteinSummaryHeader() |
| Modifier and Type | Method and Description |
|---|---|
double |
getInitialMinPeptideProb()
Gets the value of the initialMinPeptideProb property.
|
double |
getMinPeptideProbability()
Gets the value of the minPeptideProbability property.
|
double |
getMinPeptideWeight()
Gets the value of the minPeptideWeight property.
|
Integer |
getNumInput1Spectra()
Gets the value of the numInput1Spectra property.
|
Integer |
getNumInput2Spectra()
Gets the value of the numInput2Spectra property.
|
Integer |
getNumInput3Spectra()
Gets the value of the numInput3Spectra property.
|
Integer |
getNumInput4Spectra()
Gets the value of the numInput4Spectra property.
|
Integer |
getNumInput5Spectra()
Gets the value of the numInput5Spectra property.
|
double |
getNumPredictedCorrectProts()
Gets the value of the numPredictedCorrectProts property.
|
String |
getOrganism()
Gets the value of the organism property.
|
ProgramDetails |
getProgramDetails()
Gets the value of the programDetails property.
|
String |
getReferenceDatabase()
Gets the value of the referenceDatabase property.
|
String |
getResidueSubstitutionList()
Gets the value of the residueSubstitutionList property.
|
String |
getSampleEnzyme()
Gets the value of the sampleEnzyme property.
|
String |
getSourceFiles()
Gets the value of the sourceFiles property.
|
String |
getSourceFilesAlt()
Gets the value of the sourceFilesAlt property.
|
String |
getSourceFileXtn()
Gets the value of the sourceFileXtn property.
|
Double |
getTotalNoSpectrumIds()
Gets the value of the totalNoSpectrumIds property.
|
String |
getWinCygReferenceDatabase()
Gets the value of the winCygReferenceDatabase property.
|
String |
getWinCygSourceFiles()
Gets the value of the winCygSourceFiles property.
|
void |
setInitialMinPeptideProb(double value)
Sets the value of the initialMinPeptideProb property.
|
void |
setMinPeptideProbability(double value)
Sets the value of the minPeptideProbability property.
|
void |
setMinPeptideWeight(double value)
Sets the value of the minPeptideWeight property.
|
void |
setNumInput1Spectra(Integer value)
Sets the value of the numInput1Spectra property.
|
void |
setNumInput2Spectra(Integer value)
Sets the value of the numInput2Spectra property.
|
void |
setNumInput3Spectra(Integer value)
Sets the value of the numInput3Spectra property.
|
void |
setNumInput4Spectra(Integer value)
Sets the value of the numInput4Spectra property.
|
void |
setNumInput5Spectra(Integer value)
Sets the value of the numInput5Spectra property.
|
void |
setNumPredictedCorrectProts(double value)
Sets the value of the numPredictedCorrectProts property.
|
void |
setOrganism(String value)
Sets the value of the organism property.
|
void |
setProgramDetails(ProgramDetails value)
Sets the value of the programDetails property.
|
void |
setReferenceDatabase(String value)
Sets the value of the referenceDatabase property.
|
void |
setResidueSubstitutionList(String value)
Sets the value of the residueSubstitutionList property.
|
void |
setSampleEnzyme(String value)
Sets the value of the sampleEnzyme property.
|
void |
setSourceFiles(String value)
Sets the value of the sourceFiles property.
|
void |
setSourceFilesAlt(String value)
Sets the value of the sourceFilesAlt property.
|
void |
setSourceFileXtn(String value)
Sets the value of the sourceFileXtn property.
|
void |
setTotalNoSpectrumIds(Double value)
Sets the value of the totalNoSpectrumIds property.
|
void |
setWinCygReferenceDatabase(String value)
Sets the value of the winCygReferenceDatabase property.
|
void |
setWinCygSourceFiles(String value)
Sets the value of the winCygSourceFiles property.
|
protected ProgramDetails programDetails
protected String referenceDatabase
protected String winCygReferenceDatabase
protected String residueSubstitutionList
protected String organism
protected String sourceFiles
protected String sourceFilesAlt
protected String winCygSourceFiles
protected String sourceFileXtn
protected double minPeptideProbability
protected double minPeptideWeight
protected double numPredictedCorrectProts
protected Integer numInput1Spectra
protected Integer numInput2Spectra
protected Integer numInput3Spectra
protected Integer numInput4Spectra
protected Integer numInput5Spectra
protected double initialMinPeptideProb
protected Double totalNoSpectrumIds
protected String sampleEnzyme
public ProgramDetails getProgramDetails()
ProgramDetailspublic void setProgramDetails(ProgramDetails value)
value - allowed object is
ProgramDetailspublic String getReferenceDatabase()
Stringpublic void setReferenceDatabase(String value)
value - allowed object is
Stringpublic String getWinCygReferenceDatabase()
Stringpublic void setWinCygReferenceDatabase(String value)
value - allowed object is
Stringpublic String getResidueSubstitutionList()
Stringpublic void setResidueSubstitutionList(String value)
value - allowed object is
Stringpublic String getOrganism()
Stringpublic void setOrganism(String value)
value - allowed object is
Stringpublic String getSourceFiles()
Stringpublic void setSourceFiles(String value)
value - allowed object is
Stringpublic String getSourceFilesAlt()
Stringpublic void setSourceFilesAlt(String value)
value - allowed object is
Stringpublic String getWinCygSourceFiles()
Stringpublic void setWinCygSourceFiles(String value)
value - allowed object is
Stringpublic String getSourceFileXtn()
Stringpublic void setSourceFileXtn(String value)
value - allowed object is
Stringpublic double getMinPeptideProbability()
public void setMinPeptideProbability(double value)
public double getMinPeptideWeight()
public void setMinPeptideWeight(double value)
public double getNumPredictedCorrectProts()
public void setNumPredictedCorrectProts(double value)
public Integer getNumInput1Spectra()
Stringpublic void setNumInput1Spectra(Integer value)
value - allowed object is
Stringpublic Integer getNumInput2Spectra()
Stringpublic void setNumInput2Spectra(Integer value)
value - allowed object is
Stringpublic Integer getNumInput3Spectra()
Stringpublic void setNumInput3Spectra(Integer value)
value - allowed object is
Stringpublic Integer getNumInput4Spectra()
Stringpublic void setNumInput4Spectra(Integer value)
value - allowed object is
Stringpublic Integer getNumInput5Spectra()
Stringpublic void setNumInput5Spectra(Integer value)
value - allowed object is
Stringpublic double getInitialMinPeptideProb()
public void setInitialMinPeptideProb(double value)
public Double getTotalNoSpectrumIds()
Doublepublic void setTotalNoSpectrumIds(Double value)
value - allowed object is
Doublepublic String getSampleEnzyme()
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