| Package | Description |
|---|---|
| umich.ms.datatypes | |
| umich.ms.datatypes.scan | |
| umich.ms.datatypes.scan.impl | |
| umich.ms.datatypes.scancollection | |
| umich.ms.datatypes.scancollection.impl |
| Modifier and Type | Field and Description |
|---|---|
protected IScanCollection |
LCMSData.scans |
| Modifier and Type | Method and Description |
|---|---|
IScanCollection |
LCMSData.getScans() |
| Constructor and Description |
|---|
LCMSData(LCMSDataSource<?> source,
IScanCollection scans)
You can pass you IScanCollection implementation, but you likely won't
want to do that.
|
| Modifier and Type | Field and Description |
|---|---|
protected IScanCollection |
AbstractScan.scans
If this scan was added to a scan collection, this field should reference it
|
| Modifier and Type | Method and Description |
|---|---|
IScanCollection |
IScan.getScanCollection() |
IScanCollection |
AbstractScan.getScanCollection() |
| Modifier and Type | Method and Description |
|---|---|
void |
IScan.setScanCollection(IScanCollection scans) |
void |
AbstractScan.setScanCollection(IScanCollection scans) |
| Modifier and Type | Method and Description |
|---|---|
IScanCollection |
ScanDefault.getScans() |
| Modifier and Type | Method and Description |
|---|---|
void |
ScanDefault.setScans(IScanCollection scans) |
| Constructor and Description |
|---|
ScanDefault(IScanCollection scans,
int num) |
ScanDefault(IScanCollection scans,
int num,
double rt,
int msLevel,
boolean isCentroided) |
| Modifier and Type | Method and Description |
|---|---|
static void |
ScanCollectionHelper.finalizePrecursorWindows(IScanCollection scans)
Calling this method only makes sense if the whole LC/MS structure has been parsed.
|
static void |
ScanCollectionHelper.finalizeScanCollection(IScanCollection scans)
Sets relationships between parent/child scans based on scan numbering.
|
| Modifier and Type | Class and Description |
|---|---|
class |
ScanCollectionDefault
The default implementation of
IScanCollection. |
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