Package GNormPluslib
Class GNormPlus
- java.lang.Object
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- GNormPluslib.GNormPlus
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public class GNormPlus extends Object
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Field Summary
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Constructor Summary
Constructors Constructor Description GNormPlus()
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Method Summary
All Methods Static Methods Concrete Methods Modifier and Type Method Description static voidloadConfiguration(InputStream setupFileStream, String FocusSpecies)static StringloadResources(String FocusSpecies, double startTime)static voidmain(String[] args)static voidprocessFile(String inputFilePath, String InputFile, String outputFilePath, double startTime, String TrainTest)
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Field Detail
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initialized
public static boolean initialized
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PT_Species
public static PrefixTree PT_Species
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PT_Cell
public static PrefixTree PT_Cell
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PT_CTDGene
public static PrefixTree PT_CTDGene
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PT_Gene
public static PrefixTree PT_Gene
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PT_GeneChromosome
public static PrefixTree PT_GeneChromosome
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PT_FamilyName
public static PrefixTree PT_FamilyName
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SetupFile
public static String SetupFile
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Method Detail
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main
public static void main(String[] args) throws IOException, InterruptedException, XMLStreamException, SQLException
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processFile
public static void processFile(String inputFilePath, String InputFile, String outputFilePath, double startTime, String TrainTest) throws IOException, XMLStreamException
- Throws:
IOExceptionXMLStreamException
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loadResources
public static String loadResources(String FocusSpecies, double startTime) throws IOException
- Throws:
IOException
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loadConfiguration
public static void loadConfiguration(InputStream setupFileStream, String FocusSpecies) throws IOException
- Throws:
IOException
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