Package GNormPluslib

Class PrefixTree

java.lang.Object

GNormPluslib.PrefixTree

public class PrefixTree
extends Object

Field Summary

Fields

Modifier and Type	Field	Description
static HashMap<String,String>	StopWord_hash

Constructor Summary

Constructors

Constructor	Description
PrefixTree()

Method Summary

Modifier and Type	Method	Description
void	Dictionary2Tree_Combine(String Filename, String StopWords, String MentionType)
void	Dictionary2Tree_UniqueGene(String Filename, String StopWords, String Preifx)
void	Dictionary2Tree_UniqueSpecies(String Filename, String StopWords, String Preifx)
void	Hash2Tree(HashMap<String,String> ID2Names)
void	insertMention(String Mention, String Identifier)
String	MentionMatch(String Mentions)
String	MentionMatch_species(String Mentions)
String	PrintTree()
void	SaveTree(String outputfile)
ArrayList<String>	SearchMentionLocation(String Doc, String ConceptType)
void	TreeFile2Tree(String Filename)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

StopWord_hash

public static HashMap<String,String> StopWord_hash

Constructor Detail

PrefixTree

public PrefixTree()

Method Detail

Hash2Tree

public void Hash2Tree(HashMap<String,String> ID2Names)

Dictionary2Tree_Combine

public void Dictionary2Tree_Combine(String Filename,
                                    String StopWords,
                                    String MentionType)

Dictionary2Tree_UniqueGene

public void Dictionary2Tree_UniqueGene(String Filename,
                                       String StopWords,
                                       String Preifx)

Dictionary2Tree_UniqueSpecies

public void Dictionary2Tree_UniqueSpecies(String Filename,
                                          String StopWords,
                                          String Preifx)

TreeFile2Tree

public void TreeFile2Tree(String Filename)

MentionMatch

public String MentionMatch(String Mentions)

MentionMatch_species

public String MentionMatch_species(String Mentions)

SearchMentionLocation

public ArrayList<String> SearchMentionLocation(String Doc,
                                               String ConceptType)

PrintTree

public String PrintTree()

SaveTree

public void SaveTree(String outputfile)
              throws IOException

Throws:

IOException

insertMention

public void insertMention(String Mention,
                          String Identifier)