class |
Absolute |
Author: @haesleinhuepf
November 2019
|
class |
AbsoluteDifference |
Author: @haesleinhuepf
June 2020
|
class |
AddImageAndScalar |
Author: @haesleinhuepf
December 2018
|
class |
AddImages |
Author: @haesleinhuepf
12 2018
|
class |
AddImagesWeighted |
Author: @haesleinhuepf
December 2018
|
class |
AdjacencyMatrixToTouchMatrix |
Author: @haesleinhuepf
April 2020
|
class |
AffineTransform |
Deprecated.
|
class |
AffineTransform2D |
Author: @haesleinhuepf
December 2019
|
class |
AffineTransform3D |
Author: @haesleinhuepf
December 2019
|
class |
ApplyVectorField2D |
Author: @haesleinhuepf
12 2018
|
class |
ApplyVectorField3D |
Author: @haesleinhuepf
12 2018
|
class |
ArgMaximumZProjection |
Author: @haesleinhuepf
December 2018
|
class |
AutomaticThreshold |
AutomaticThreshold
|
class |
AverageDistanceOfNClosestPoints |
|
class |
AverageDistanceOfNFarOffPoints |
|
class |
AverageDistanceOfTouchingNeighbors |
|
class |
BinaryAnd |
Author: @haesleinhuepf
12 2018
|
class |
BinaryEdgeDetection |
Author: @haesleinhuepf
September 2019
|
class |
BinaryFillHoles |
Author: @haesleinhuepf
March 2020
|
class |
BinaryIntersection |
|
class |
BinaryNot |
Author: @haesleinhuepf
12 2018
|
class |
BinaryOr |
Author: @haesleinhuepf
12 2018
|
class |
BinarySubtract |
Author: @haesleinhuepf
September 2019
|
class |
BinaryUnion |
|
class |
BinaryXOr |
Author: @haesleinhuepf
12 2018
|
class |
Blur2D |
Deprecated.
|
class |
Blur3D |
Deprecated.
|
class |
BottomHatBox |
|
class |
BottomHatSphere |
|
class |
CentroidsOfBackgroundAndLabels |
Author: @haesleinhuepf
July 2020
|
class |
CentroidsOfLabels |
Author: @haesleinhuepf
December 2018
|
class |
CloseIndexGapsInLabelMap |
ConnectedComponentsLabeling
|
class |
ClosingBox |
|
class |
ClosingDiamond |
|
class |
CombineHorizontally |
Author: @haesleinhuepf
May 2020
|
class |
CombineVertically |
Author: @haesleinhuepf
May 2020
|
class |
ConcatenateStacks |
Author: @haesleinhuepf
March 2020
|
class |
ConnectedComponentsLabelingBox |
ConnectedComponentsLabeling
|
class |
ConnectedComponentsLabelingDiamond |
ConnectedComponentsLabeling
|
class |
ConvertFloat |
Author: @haesleinhuepf
12 2018
|
class |
ConvertUInt16 |
Author: @haesleinhuepf
12 2018
|
class |
ConvertUInt8 |
Author: @haesleinhuepf
12 2018
|
class |
Convolve |
Author: @haesleinhuepf
December 2018
|
class |
Copy |
Author: @haesleinhuepf
12 2018
|
class |
CopySlice |
Author: @haesleinhuepf
December 2018
|
class |
CountNonZeroPixels |
Author: @haesleinhuepf
June 2019
|
class |
CountNonZeroPixels2DSphere |
Author: @haesleinhuepf
December 2018
|
class |
CountNonZeroPixelsSliceBySliceSphere |
Author: @haesleinhuepf
December 2018
|
class |
CountNonZeroVoxels3DSphere |
Author: @haesleinhuepf
December 2018
|
class |
CountTouchingNeighbors |
Author: @haesleinhuepf
October 2019
|
class |
Crop2D |
Author: @haesleinhuepf
December 2018
|
class |
Crop3D |
Author: @haesleinhuepf
December 2018
|
class |
DetectLabelEdges |
Author: @haesleinhuepf
October 2019
|
class |
DetectMaxima2DBox |
Author: @haesleinhuepf
May 2020
|
class |
DetectMaxima3DBox |
Author: @haesleinhuepf
May 2020
|
class |
DetectMaximaSliceBySliceBox |
Author: @haesleinhuepf
December 2018
|
class |
DetectMinima2DBox |
Author: @haesleinhuepf
May 2020
|
class |
DetectMinima3DBox |
Author: @haesleinhuepf
May 2020
|
class |
DetectMinimaSliceBySliceBox |
Author: @haesleinhuepf
December 2018
|
class |
DifferenceOfGaussian2D |
|
class |
DifferenceOfGaussian3D |
|
class |
DilateBox |
Author: @haesleinhuepf
12 2018
|
class |
DilateBoxSliceBySlice |
Author: @haesleinhuepf
12 2018
|
class |
DilateSphere |
Author: @haesleinhuepf
12 2018
|
class |
DilateSphereSliceBySlice |
Author: @haesleinhuepf
12 2018
|
class |
DistanceMap |
Author: @haesleinhuepf
September 2019
|
class |
DistanceMatrixToMesh |
Author: @haesleinhuepf
December 2019
|
class |
DivideImages |
Author: @haesleinhuepf
12 2018
|
class |
Downsample2D |
Author: @haesleinhuepf
12 2018
|
class |
Downsample3D |
Author: @haesleinhuepf
12 2018
|
class |
DownsampleSliceBySliceHalfMedian |
Author: @haesleinhuepf
12 2018
|
class |
EntropyBox |
|
class |
Equal |
Author: @haesleinhuepf
August 2019
|
class |
EqualConstant |
Author: @haesleinhuepf
August 2019
|
class |
EqualizeMeanIntensitiesOfSlices |
|
class |
ErodeBox |
Author: @haesleinhuepf
12 2018
|
class |
ErodeBoxSliceBySlice |
Author: @haesleinhuepf
12 2018
|
class |
ErodeSphere |
Author: @haesleinhuepf
12 2018
|
class |
ErodeSphereSliceBySlice |
Author: @haesleinhuepf
12 2018
|
class |
ExcludeLabels |
Author: @haesleinhuepf
April 2020
|
class |
ExcludeLabelsOnEdges |
Author: @haesleinhuepf
June 2019
|
class |
ExcludeLabelsOnSurface |
Author: @haesleinhuepf
June 2019
|
class |
ExcludeLabelsSubSurface |
Author: @haesleinhuepf
June 2019
|
class |
ExcludeLabelsWithValuesOutOfRange |
Author: @haesleinhuepf
May 2020
|
class |
ExcludeLabelsWithValuesWithinRange |
Author: @haesleinhuepf
May 2020
|
class |
Exponential |
Based on
net.haesleinhuepf.clij.macro.modules.Power.java
Author: @haesleinhuepf
December 2018
modified by: @phaub
July 2019
|
class |
ExtendLabelingViaVoronoi |
Author: @haesleinhuepf
June 2020
|
class |
Flip2D |
Author: @haesleinhuepf
12 2018
|
class |
Flip3D |
Author: @haesleinhuepf
12 2018
|
class |
FloodFillDiamond |
Author: @haesleinhuepf
March 2020
|
class |
GaussianBlur2D |
Author: @haesleinhuepf
12 2018
|
class |
GaussianBlur3D |
Author: @haesleinhuepf
12 2018
|
class |
GenerateBinaryOverlapMatrix |
Author: @haesleinhuepf
October 2019
|
class |
GenerateDistanceMatrix |
Author: @haesleinhuepf
December 2018
|
class |
GenerateJaccardIndexMatrix |
Author: @haesleinhuepf
June 2020
|
class |
GenerateParametricImage |
|
class |
GenerateTouchCountMatrix |
Author: @haesleinhuepf
June 2020
|
class |
GenerateTouchMatrix |
Author: @haesleinhuepf
October 2019
|
class |
GradientX |
Author: @haesleinhuepf
12 2018
|
class |
GradientY |
Author: @haesleinhuepf
12 2018
|
class |
GradientZ |
Author: @haesleinhuepf
12 2018
|
class |
Greater |
Author: @haesleinhuepf
August 2019
|
class |
GreaterConstant |
Author: @haesleinhuepf
August 2019
|
class |
GreaterOrEqual |
Author: @haesleinhuepf
August 2019
|
class |
GreaterOrEqualConstant |
Author: @haesleinhuepf
August 2019
|
class |
Histogram |
Author: @haesleinhuepf
December 2019
|
class |
ImageToStack |
Author: @haesleinhuepf
February 2020
|
class |
Invert |
Author: @haesleinhuepf
12 2018
|
class |
LabelCentroidsToPointList |
|
class |
LabelledSpotsToPointList |
|
class |
LabelSpots |
|
class |
LabelToMask |
Author: @haesleinhuepf
August 2019
|
class |
LabelVoronoiOctagon |
Author: @haesleinhuepf
April 2020
|
class |
LaplaceBox |
|
class |
LaplaceDiamond |
|
class |
LocalThreshold |
Author: @haesleinhuepf
12 2018
|
class |
Logarithm |
Based on
net.haesleinhuepf.clij.macro.modules.Power.java
Author: @haesleinhuepf
December 2018
modified by: @phaub
July 2019
|
class |
Mask |
Author: @haesleinhuepf
12 2018
|
class |
MaskLabel |
Author: @haesleinhuepf
12 2018
|
class |
MaskStackWithPlane |
Author: @haesleinhuepf
12 2018
|
class |
Maximum2DBox |
Author: @haesleinhuepf
12 2018
|
class |
Maximum2DSphere |
Author: @haesleinhuepf
12 2018
|
class |
Maximum3DBox |
Author: @haesleinhuepf
12 2018
|
class |
Maximum3DSphere |
Author: @haesleinhuepf
12 2018
|
class |
MaximumImageAndScalar |
Author: @haesleinhuepf
12 2018
|
class |
MaximumImages |
Author: @haesleinhuepf
12 2018
|
class |
MaximumOctagon |
Author: @haesleinhuepf
December 2019
|
class |
MaximumOfTouchingNeighbors |
|
class |
MaximumSliceBySliceSphere |
Author: @haesleinhuepf
12 2018
|
class |
MaximumXProjection |
Author: @haesleinhuepf
December 2018
|
class |
MaximumYProjection |
Author: @haesleinhuepf
December 2018
|
class |
MaximumZProjection |
Author: @haesleinhuepf
December 2018
|
class |
MaximumZProjectionBounded |
Author: @haesleinhuepf
December 2019
|
class |
Mean2DBox |
Author: @haesleinhuepf
12 2018
|
class |
Mean2DSphere |
Author: @haesleinhuepf
December 2018
|
class |
Mean3DBox |
Author: @haesleinhuepf
12 2018
|
class |
Mean3DSphere |
Author: @haesleinhuepf
12 2018
|
class |
MeanOfTouchingNeighbors |
|
class |
MeanSliceBySliceSphere |
Author: @haesleinhuepf
12 2018
|
class |
MeanXProjection |
Author: @haesleinhuepf
June 2020
|
class |
MeanYProjection |
Author: @haesleinhuepf
June 2020
|
class |
MeanZProjection |
Author: @haesleinhuepf
December 2018
|
class |
MeanZProjectionBounded |
Author: @haesleinhuepf
December 2019
|
class |
Median2DBox |
Author: @haesleinhuepf
12 2018
|
class |
Median2DSphere |
Author: @haesleinhuepf
12 2018
|
class |
Median3DBox |
Author: @haesleinhuepf
12 2018
|
class |
Median3DSphere |
Author: @haesleinhuepf
12 2018
|
class |
MedianOfTouchingNeighbors |
|
class |
MedianSliceBySliceBox |
Author: @haesleinhuepf
12 2018
|
class |
MedianSliceBySliceSphere |
Author: @haesleinhuepf
12 2018
|
class |
MedianZProjection |
Author: @haesleinhuepf
June 2019
|
class |
Minimum2DBox |
Author: @haesleinhuepf
12 2018
|
class |
Minimum2DSphere |
Author: @haesleinhuepf
12 2018
|
class |
Minimum3DBox |
Author: @haesleinhuepf
12 2018
|
class |
Minimum3DSphere |
Author: @haesleinhuepf
12 2018
|
class |
MinimumDistanceOfTouchingNeighbors |
|
class |
MinimumImageAndScalar |
Author: @haesleinhuepf
12 2018
|
class |
MinimumImages |
Author: @haesleinhuepf
12 2018
|
class |
MinimumOctagon |
Author: @haesleinhuepf
December 2019
|
class |
MinimumOfTouchingNeighbors |
|
class |
MinimumSliceBySliceSphere |
Author: @haesleinhuepf
12 2018
|
class |
MinimumXProjection |
Author: @haesleinhuepf
June 2020
|
class |
MinimumYProjection |
Author: @haesleinhuepf
June 2020
|
class |
MinimumZProjection |
Author: @haesleinhuepf
December 2018
|
class |
MinimumZProjectionBounded |
Author: @haesleinhuepf
December 2019
|
class |
MinimumZProjectionThresholdedBounded |
Author: @haesleinhuepf
December 2019
|
class |
MultiplyImageAndScalar |
Author: @haesleinhuepf
December 2018
|
class |
MultiplyImages |
Author: @haesleinhuepf
12 2018
|
class |
MultiplyImageStackWithScalars |
Author: @haesleinhuepf
December 2018
|
class |
MultiplyMatrix |
Author: @haesleinhuepf
August 2019
|
class |
MultiplyStackWithPlane |
Author: @haesleinhuepf
December 2018
|
class |
NeighborsOfNeighbors |
Author: @haesleinhuepf
May 2020
|
class |
NonzeroMaximumBox |
|
class |
NonzeroMaximumDiamond |
|
class |
NonzeroMinimumBox |
|
class |
NonzeroMinimumDiamond |
|
class |
NotEqual |
Author: @haesleinhuepf
August 2019
|
class |
NotEqualConstant |
Author: @haesleinhuepf
August 2019
|
class |
OnlyzeroOverwriteMaximumBox |
|
class |
OnlyzeroOverwriteMaximumDiamond |
|
class |
OpeningBox |
|
class |
OpeningDiamond |
|
class |
Paste2D |
Author: @haesleinhuepf
December 2018
|
class |
Paste3D |
Author: @haesleinhuepf
December 2018
|
class |
PointIndexListToMesh |
PointIndexListToMesh
|
class |
PointlistToLabelledSpots |
Author: @haesleinhuepf
April 2020
|
class |
Power |
Author: @haesleinhuepf
December 2018
|
class |
PowerImages |
Author: @haesleinhuepf
August 2019
|
class |
ReduceStack |
Author: @haesleinhuepf
May 2020
|
class |
ReplaceIntensities |
|
class |
ReplaceIntensity |
|
class |
ReplacePixelsIfZero |
Author: @haesleinhuepf
June 2020
|
class |
Resample |
Author: @haesleinhuepf
12 2018
|
class |
ResliceBottom |
Author: @haesleinhuepf
12 2018
|
class |
ResliceLeft |
Author: @haesleinhuepf
12 2018
|
class |
ResliceRadial |
ResliceRadial
|
class |
ResliceRadialTop |
ResliceRadial
|
class |
ResliceRight |
Author: @haesleinhuepf
12 2018
|
class |
ResliceTop |
Author: @haesleinhuepf
12 2018
|
class |
Rotate2D |
Author: @haesleinhuepf
12 2018
|
class |
Rotate3D |
Author: @haesleinhuepf
12 2018
|
class |
RotateClockwise |
Author: @haesleinhuepf
12 2018
|
class |
RotateCounterClockwise |
Author: @haesleinhuepf
12 2018
|
class |
RotateLeft |
Deprecated.
|
class |
RotateRight |
Deprecated.
|
class |
Scale |
Deprecated.
|
class |
Scale2D |
Author: @haesleinhuepf
12 2018
|
class |
Scale3D |
Author: @haesleinhuepf
12 2018
|
class |
ShortestDistances |
|
class |
Smaller |
Author: @haesleinhuepf
August 2019
|
class |
SmallerConstant |
Author: @haesleinhuepf
August 2019
|
class |
SmallerOrEqual |
Author: @haesleinhuepf
August 2019
|
class |
SmallerOrEqualConstant |
Author: @haesleinhuepf
August 2019
|
class |
Sobel |
Author: @ruthhwj, @haesleinhuepf
November 2019
|
class |
SpotsToPointList |
|
class |
SquaredDifference |
Author: @haesleinhuepf
June 2020
|
class |
StandardDeviationOfTouchingNeighbors |
|
class |
StandardDeviationZProjection |
Author: @haesleinhuepf
June 2019
|
class |
SubtractImageFromScalar |
Author: @haesleinhuepf
12 2018
|
class |
SubtractImages |
Author: @haesleinhuepf
12 2018
|
class |
SumImageSliceBySlice |
Author: @haesleinhuepf
December 2018
|
class |
SumXProjection |
Author: @haesleinhuepf
December 2018
|
class |
SumYProjection |
Author: @haesleinhuepf
December 2018
|
class |
SumZProjection |
Author: @haesleinhuepf
December 2018
|
class |
Threshold |
Author: @haesleinhuepf
December 2018
|
class |
ThresholdDefault |
ThresholdDefault
|
class |
ThresholdHuang |
ThresholdHuang
|
class |
ThresholdIJ_IsoData |
ThresholdIJ_IsoData
|
class |
ThresholdIntermodes |
ThresholdIntermodes
|
class |
ThresholdIsoData |
ThresholdIsoData
|
class |
ThresholdLi |
ThresholdLi
|
class |
ThresholdMaxEntropy |
ThresholdMaxEntropy
|
class |
ThresholdMean |
ThresholdMean
|
class |
ThresholdMinError |
ThresholdMinError
|
class |
ThresholdMinimum |
ThresholdMinimum
|
class |
ThresholdMoments |
ThresholdMoments
|
class |
ThresholdOtsu |
ThresholdOtsu
|
class |
ThresholdPercentile |
ThresholdPercentile
|
class |
ThresholdRenyiEntropy |
ThresholdRenyiEntropy
|
class |
ThresholdShanbhag |
ThresholdShanbhag
|
class |
ThresholdTriangle |
ThresholdTriangle
|
class |
ThresholdYen |
ThresholdYen
|
class |
TopHatBox |
|
class |
TopHatSphere |
|
class |
TouchMatrixToAdjacencyMatrix |
Author: @haesleinhuepf
April 2020
|
class |
TouchMatrixToMesh |
Author: @haesleinhuepf
November 2019
|
class |
Translate2D |
Author: @haesleinhuepf
12 2018
|
class |
Translate3D |
Author: @haesleinhuepf
12 2018
|
class |
TransposeXY |
|
class |
TransposeXZ |
|
class |
TransposeYZ |
|
class |
UndefinedToZero |
Author: @haesleinhuepf
June 2020
|
class |
VoronoiLabeling |
Author: @haesleinhuepf
March 2020
|
class |
VoronoiOctagon |
Author: @haesleinhuepf
March 2020
|
class |
Watershed |
Author: @haesleinhuepf
December 2018
|
class |
WriteValuesToPositions |
Author: @haesleinhuepf
June 2019
|