| Package | Description |
|---|---|
| umcg.genetica.io.binInteraction | |
| umcg.genetica.io.binInteraction.variant |
| Modifier and Type | Method and Description |
|---|---|
BinaryInteractionVariant |
BinaryInteractionFile.getVariant(int pointer) |
BinaryInteractionVariant |
BinaryInteractionFile.getVariant(String name) |
BinaryInteractionVariant |
BinaryInteractionFile.getVariant(String chr,
int pos) |
| Modifier and Type | Method and Description |
|---|---|
List<BinaryInteractionVariant> |
BinaryInteractionFile.getVariants() |
| Modifier and Type | Method and Description |
|---|---|
BinaryInteractionFileConstructorBuilder |
BinaryInteractionFileConstructorBuilder.setVariants(BinaryInteractionVariant[] variants) |
| Constructor and Description |
|---|
BinaryInteractionFile(File interactionFile,
boolean readOnly,
BinaryInteractionCohort[] cohorts,
BinaryInteractionGene[] genes,
BinaryInteractionVariant[] variants,
String[] covariates,
int[][] covariatesTested,
long timeStamp,
boolean allCovariants,
boolean metaAnalysis,
boolean normalQtlStored,
boolean flippedZscoreStored,
String fileDescription,
long interactions,
long startQtlBlock,
long startInteractionBlock) |
| Modifier and Type | Class and Description |
|---|---|
class |
BinaryInteractionVariantAbstract |
class |
BinaryInteractionVariantCreator |
class |
BinaryInteractionVariantStatic |
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