Uses of Class
umcg.genetica.io.pileup.PileupParseException

Packages that use PileupParseException

Package	Description
umcg.genetica.io.pileup

Uses of PileupParseException in umcg.genetica.io.pileup

Methods in umcg.genetica.io.pileup that throw PileupParseException

Modifier and Type	Method and Description
static PileupEntry	PileupFile.parsePileupLine(String line, int minimumBaseQuality)

Constructors in umcg.genetica.io.pileup that throw PileupParseException

Constructor and Description
PileupEntry(String chr, int pos, Allele refAllele, int readDepth, String basesString, int minimumBaseQuality) Only handles SNPs
PileupEntry(String chr, int pos, Allele refAllele, int readDepth, String basesString, String basesQualityString, int minimumBaseQuality)