umcg.genetica.io.trityper.bin

Class BinaryGZipFloatMatrix

java.lang.Object

umcg.genetica.io.trityper.bin.BinaryGZipFloatMatrix

public class BinaryGZipFloatMatrix
extends Object

Author:

harm-jan

Field Summary

Fields

Modifier and Type	Field and Description
static boolean	R
static boolean	W

Constructor Summary

Constructors

Constructor and Description
BinaryGZipFloatMatrix(String filename, boolean W)

Method Summary

Modifier and Type	Method and Description
void	close()
void	flush()
Float[]	read(long index, long nextIndex, int numElems)
byte[]	readDeflated(long index, long nextIndex, int numElems)
long	write(byte[] input)
long	write(Float[] zscorelist)
long	writeDeflated(byte[] input)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

W

public static boolean W

R

public static boolean R

Constructor Detail

BinaryGZipFloatMatrix

public BinaryGZipFloatMatrix(String filename,
                             boolean W)
                      throws IOException

Throws:

IOException

Method Detail

write

public long write(Float[] zscorelist)
           throws IOException

Throws:

IOException

write

public long write(byte[] input)
           throws IOException

Throws:

IOException

writeDeflated

public long writeDeflated(byte[] input)
                   throws IOException

Throws:

IOException

flush

public void flush()
           throws IOException

Throws:

IOException

read

public Float[] read(long index,
                    long nextIndex,
                    int numElems)
             throws IOException,
                    DataFormatException

Throws:

IOException

DataFormatException

readDeflated

public byte[] readDeflated(long index,
                           long nextIndex,
                           int numElems)
                    throws IOException

Throws:

IOException

close

public void close()
           throws IOException

Throws:

IOException