umcg.genetica.io.trityper.bin

Class BinaryResultSNP

java.lang.Object

umcg.genetica.io.trityper.bin.BinaryResultSNP

public class BinaryResultSNP
extends Object

Author:

harmjan

Constructor Summary

Constructors

Constructor and Description
BinaryResultSNP()

Method Summary

Modifier and Type	Method and Description
void	clearMetaData()
byte[]	getAlleles()
Byte	getAssessedAllele()
Byte	getChr()
Integer	getChrpos()
Double	getCr()
Double	getHwe()
Integer	getId()
Double	getMaf()
Byte	getMinorAllele()
String	getName()
Integer	getNumsamples()
Long	getzScoreIndex()
void	setAlleles(byte[] alleles)
void	setAssessedAllele(Byte assessedAllele)
void	setChr(Byte chr)
void	setChrpos(Integer chrpos)
void	setCr(Double cr)
void	setHwe(Double hwe)
void	setId(Integer id)
void	setMaf(Double maf)
void	setMinorAllele(Byte minorAllele)
void	setName(String name)
void	setNumsamples(Integer numsamples)
void	setzScoreIndex(Long zScoreIndex)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BinaryResultSNP

public BinaryResultSNP()

Method Detail

getName

public String getName()

Returns:

the name

setName

public void setName(String name)

Parameters:

name - the name to set

getChr

public Byte getChr()

Returns:

the chr

setChr

public void setChr(Byte chr)

Parameters:

chr - the chr to set

getChrpos

public Integer getChrpos()

Returns:

the chrpos

setChrpos

public void setChrpos(Integer chrpos)

Parameters:

chrpos - the chrpos to set

getNumsamples

public Integer getNumsamples()

Returns:

the numsamples

setNumsamples

public void setNumsamples(Integer numsamples)

Parameters:

numsamples - the numsamples to set

getId

public Integer getId()

Returns:

the id

setId

public void setId(Integer id)

Parameters:

id - the id to set

getHwe

public Double getHwe()

Returns:

the hwe

setHwe

public void setHwe(Double hwe)

Parameters:

hwe - the hwe to set

getMaf

public Double getMaf()

Returns:

the maf

setMaf

public void setMaf(Double maf)

Parameters:

maf - the maf to set

getCr

public Double getCr()

Returns:

the cr

setCr

public void setCr(Double cr)

Parameters:

cr - the cr to set

getMinorAllele

public Byte getMinorAllele()

Returns:

the minorAllele

setMinorAllele

public void setMinorAllele(Byte minorAllele)

Parameters:

minorAllele - the minorAllele to set

getzScoreIndex

public Long getzScoreIndex()

Returns:

the zScoreIndex

setzScoreIndex

public void setzScoreIndex(Long zScoreIndex)

Parameters:

zScoreIndex - the zScoreIndex to set

getAlleles

public byte[] getAlleles()

Returns:

the alleles

setAlleles

public void setAlleles(byte[] alleles)

Parameters:

alleles - the alleles to set

getAssessedAllele

public Byte getAssessedAllele()

Returns:

the assessedAllele

setAssessedAllele

public void setAssessedAllele(Byte assessedAllele)

Parameters:

assessedAllele - the assessedAllele to set

clearMetaData

public void clearMetaData()