umcg.genetica.io.trityper.converters

Class BeagleImputedToTriTyper

java.lang.Object

umcg.genetica.io.trityper.converters.BeagleImputedToTriTyper

public class BeagleImputedToTriTyper
extends Object

Author:

harmjan

Constructor Summary

Constructors

Constructor and Description
BeagleImputedToTriTyper()

Method Summary

Modifier and Type	Method and Description
void	importImputedDataWithDosageInformationBeagle(String inputLocation, String template, String extension, String outputDir)
boolean	importImputedDataWithDosageInformationBeagleBatches(String inputDir, String template, int numBatches, String outputDir, int chrStart, int chrEnd)
void	loadFamFile(String file)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BeagleImputedToTriTyper

public BeagleImputedToTriTyper()

Method Detail

importImputedDataWithDosageInformationBeagleBatches

public boolean importImputedDataWithDosageInformationBeagleBatches(String inputDir,
                                                                   String template,
                                                                   int numBatches,
                                                                   String outputDir,
                                                                   int chrStart,
                                                                   int chrEnd)
                                                            throws IOException

Throws:

IOException

importImputedDataWithDosageInformationBeagle

public void importImputedDataWithDosageInformationBeagle(String inputLocation,
                                                         String template,
                                                         String extension,
                                                         String outputDir)
                                                  throws IOException

Throws:

IOException

loadFamFile

public void loadFamFile(String file)