umcg.genetica.io.trityper.util

Class TriTyperGenotypeDataMerger

java.lang.Object

umcg.genetica.io.trityper.util.TriTyperGenotypeDataMerger

public class TriTyperGenotypeDataMerger
extends Object

Author:

harmjan

Constructor Summary

Constructors

Constructor and Description
TriTyperGenotypeDataMerger()

Method Summary

Modifier and Type	Method and Description
void	checkMerge(String[] datasetLocations, String outputDir)
void	combinePrioritizerDatasetsMergeCommonSNPs(String baseDir1, String baseDir2, String outputDir, String snps)
static void	main(String[] args)
void	mergeDatasetsOnCommonSamples(String[] datasetLocations, String outputDir)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

TriTyperGenotypeDataMerger

public TriTyperGenotypeDataMerger()

Method Detail

main

public static void main(String[] args)

combinePrioritizerDatasetsMergeCommonSNPs

public void combinePrioritizerDatasetsMergeCommonSNPs(String baseDir1,
                                                      String baseDir2,
                                                      String outputDir,
                                                      String snps)
                                               throws IOException

Throws:

IOException

mergeDatasetsOnCommonSamples

public void mergeDatasetsOnCommonSamples(String[] datasetLocations,
                                         String outputDir)
                                  throws IOException

Throws:

IOException

checkMerge

public void checkMerge(String[] datasetLocations,
                       String outputDir)
                throws IOException

Throws:

IOException