Uses of Interface
umcg.genetica.variantAnnotator.GenomicRange

Packages that use GenomicRange

Package	Description
umcg.genetica.collections.intervaltree
umcg.genetica.io.bed
umcg.genetica.io.bedgraph
umcg.genetica.io.gtf
umcg.genetica.variantAnnotator

Uses of GenomicRange in umcg.genetica.collections.intervaltree

Methods in umcg.genetica.collections.intervaltree with type parameters of type GenomicRange

Modifier and Type	Method and Description
static <T extends GenomicRange> PerChrIntervalTree<T>	PerChrIntervalTree.createFromChrGroupedIterable(Iterable<T> elements, Class<T> classT) Elements must be grouped per chromosome

Uses of GenomicRange in umcg.genetica.io.bed

Classes in umcg.genetica.io.bed that implement GenomicRange

Modifier and Type	Class and Description
class	BedEntry

Uses of GenomicRange in umcg.genetica.io.bedgraph

Classes in umcg.genetica.io.bedgraph that implement GenomicRange

Modifier and Type	Class and Description
class	BedGraphEntry

Uses of GenomicRange in umcg.genetica.io.gtf

Classes in umcg.genetica.io.gtf that implement GenomicRange

Modifier and Type	Class and Description
class	GffElement

Uses of GenomicRange in umcg.genetica.variantAnnotator

Classes in umcg.genetica.variantAnnotator with type parameters of type GenomicRange

Modifier and Type	Class and Description
class	VariantAnnotator<E extends GenomicRange>