Package org.anchoranalysis.feature.session

Class FeatureSession

Object

org.anchoranalysis.feature.session.FeatureSession

public class FeatureSession
extends Object

A single-point in the code for creating feature-sessions (a factory).

A feature session is a context needed to calculate one or more parameters (inputs to features) on one or more features.

Within this context, caching of intermediate results and other efficiencies are implemented beneath the hood.

Author:

Owen Feehan

Method Summary

Modifier and Type	Method	Description
static <T extends FeatureInput> double	calculateWith(Feature<T> feature, T input, org.anchoranalysis.core.log.Logger logger)	Starts a feature-session for a single feature - and performs a calculation.
static <T extends FeatureInput> FeatureCalculatorSingle<T>	with(Feature<T> feature, org.anchoranalysis.core.log.Logger logger)	Starts a feature-session for a single feature.
static <T extends FeatureInput> FeatureCalculatorSingle<T>	with(Feature<T> feature, FeatureInitialization initialization, SharedFeatures sharedFeatures, org.anchoranalysis.core.log.Logger logger)	Starts a feature-session for a single feature, with specific initialization.
static <T extends FeatureInput> FeatureCalculatorSingle<T>	with(Feature<T> feature, SharedFeatures sharedFeatures, org.anchoranalysis.core.log.Logger logger)	Starts a feature-session for a single feature, with default initialization.
static <T extends FeatureInput> FeatureCalculatorMulti<T>	with(FeatureList<T> features, org.anchoranalysis.core.log.Logger logger)	Starts a feature-session for a list of features, with default initialization.
static <T extends FeatureInput> FeatureCalculatorMulti<T>	with(FeatureList<T> features, FeatureInitialization initialization, Optional<SharedFeatures> sharedFeatures, org.anchoranalysis.core.log.Logger logger, BoundReplaceStrategy<T,? extends ReplaceStrategy<T>> replaceStrategy)	Starts a feature-session for a list of features, with particular initialization, and a replaceStrategy.
static <T extends FeatureInput> FeatureCalculatorMulti<T>	with(FeatureList<T> features, FeatureInitialization initialization, SharedFeatures sharedFeatures, org.anchoranalysis.core.log.Logger logger)	Starts a feature-session for a list of features, with particular initialization.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Details

with

public static <T extends FeatureInput> FeatureCalculatorSingle<T> with(Feature<T> feature, org.anchoranalysis.core.log.Logger logger) throws org.anchoranalysis.core.exception.InitializeException

Starts a feature-session for a single feature.

Type Parameters:

T - type of parameters

Parameters:

feature - the feature.

logger - a logger.

Returns:

a calculator that will calculate just this feature for each parameter.

Throws:

org.anchoranalysis.core.exception.InitializeException

with

public static <T extends FeatureInput> FeatureCalculatorSingle<T> with(Feature<T> feature, SharedFeatures sharedFeatures, org.anchoranalysis.core.log.Logger logger) throws org.anchoranalysis.core.exception.InitializeException

Starts a feature-session for a single feature, with default initialization.

Type Parameters:

T - type of parameters

Parameters:

feature - the feature.

sharedFeatures - the shared-features to use for initialization.

logger - a logger.

Returns:

a calculator that will calculate just this feature for each parameter.

Throws:

org.anchoranalysis.core.exception.InitializeException - if the session cannot be successfully initialized.

with

public static <T extends FeatureInput> FeatureCalculatorSingle<T> with(Feature<T> feature, FeatureInitialization initialization, SharedFeatures sharedFeatures, org.anchoranalysis.core.log.Logger logger) throws org.anchoranalysis.core.exception.InitializeException

Starts a feature-session for a single feature, with specific initialization.

Type Parameters:

T - type of parameters

Parameters:

feature - the feature.

initialization - the initialization.

sharedFeatures - the particular shared-features to use for initialization.

logger - a logger.

Returns:

a calculator that will calculate just this feature for each parameter.

Throws:

org.anchoranalysis.core.exception.InitializeException - if the session cannot be successfully initialized.

with

public static <T extends FeatureInput> FeatureCalculatorMulti<T> with(FeatureList<T> features, org.anchoranalysis.core.log.Logger logger) throws org.anchoranalysis.core.exception.InitializeException

Starts a feature-session for a list of features, with default initialization.

Type Parameters:

T - type of parameters for all features.

Parameters:

features - a list of features accepting uniform type.

logger - a logger.

Returns:

a calculator that will call calculate all the features in the list for each parameter.

Throws:

org.anchoranalysis.core.exception.InitializeException - if the session cannot be successfully initialized.

with

public static <T extends FeatureInput> FeatureCalculatorMulti<T> with(FeatureList<T> features, FeatureInitialization initialization, SharedFeatures sharedFeatures, org.anchoranalysis.core.log.Logger logger) throws org.anchoranalysis.core.exception.InitializeException

Starts a feature-session for a list of features, with particular initialization.

Type Parameters:

T - type of parameters for all features.

Parameters:

features - a list of features accepting uniform type.

initialization - the particular initialization.

sharedFeatures - the particular shared-features to use for initialization.

logger - a logger.

Returns:

a calculator that will call calculate all the features in the list for each parameter.

Throws:

org.anchoranalysis.core.exception.InitializeException - if the session cannot be successfully initialized.

with

public static <T extends FeatureInput> FeatureCalculatorMulti<T> with(FeatureList<T> features, FeatureInitialization initialization, Optional<SharedFeatures> sharedFeatures, org.anchoranalysis.core.log.Logger logger, BoundReplaceStrategy<T,? extends ReplaceStrategy<T>> replaceStrategy) throws org.anchoranalysis.core.exception.InitializeException

Starts a feature-session for a list of features, with particular initialization, and a replaceStrategy.

Type Parameters:

T - type of parameters for all features.

Parameters:

features - a list of features accepting uniform type.

initialization - the particular initialization.

sharedFeatures - the particular shared-features to use for initialization.

logger - a logger.

replaceStrategy - binds a specific ReplaceStrategy to newly created caches.

Returns:

a calculator that will call calculate all the features in the list for each parameter.

Throws:

org.anchoranalysis.core.exception.InitializeException - if the session cannot be successfully initialized.

calculateWith

public static <T extends FeatureInput> double calculateWith(Feature<T> feature, T input, org.anchoranalysis.core.log.Logger logger) throws FeatureCalculationException

Starts a feature-session for a single feature - and performs a calculation.

Type Parameters:

T - type of input

Parameters:

feature - the feature.

input - for features.

logger - a logger.

Returns:

the calculated result.

Throws:

FeatureCalculationException - if the feature cannot be initialized or cannot be calculated.