Package org.anchoranalysis.image.feature.bean.object.single

Class NumberVoxels

Object

org.anchoranalysis.bean.AnchorBean<B>

org.anchoranalysis.bean.initializable.InitializableBean<Feature<T>,FeatureInitialization>

org.anchoranalysis.feature.bean.Feature<FeatureInputSingleObject>

org.anchoranalysis.image.feature.bean.object.single.FeatureSingleObject

org.anchoranalysis.image.feature.bean.object.single.NumberVoxels

public class NumberVoxels
extends FeatureSingleObject

Calculates the number of voxels in a single object.

This feature can optionally calculate the number of voxels in the maximum intensity projection (MIP) of the object instead of the full 3D volume.

Constructor Summary

Constructors

Constructor	Description
NumberVoxels()

Method Summary

Modifier and Type	Method	Description
double	calculate(FeatureCalculationInput<FeatureInputSingleObject> input)
boolean	isMip()	If true, calculates the number of voxels in the maximum intensity projection (MIP) of the object.
void	setMip(boolean mip)	If true, calculates the number of voxels in the maximum intensity projection (MIP) of the object.

Methods inherited from class org.anchoranalysis.image.feature.bean.object.single.FeatureSingleObject

inputType

Methods inherited from class org.anchoranalysis.feature.bean.Feature

assignTo, beforeCalc, calculateCheckInitialized, castAs, createListChildFeatures, describeBean, describeParameters, descriptionLong, duplicateChangeName, getCustomName, getFriendlyName, onInitialization, setCustomName, toString

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

NumberVoxels

public NumberVoxels()

Method Details

calculate

public double calculate(FeatureCalculationInput<FeatureInputSingleObject> input) throws FeatureCalculationException

Specified by:

calculate in class Feature<FeatureInputSingleObject>

Throws:

FeatureCalculationException

isMip

public boolean isMip()

If true, calculates the number of voxels in the maximum intensity projection (MIP) of the object. If false, calculates the number of voxels in the full 3D volume of the object.

setMip

public void setMip(boolean mip)

If true, calculates the number of voxels in the maximum intensity projection (MIP) of the object. If false, calculates the number of voxels in the full 3D volume of the object.