Package org.anchoranalysis.image.feature.calculator.merged

Class MergedPairsFeatures

Object

org.anchoranalysis.image.feature.calculator.merged.MergedPairsFeatures

public class MergedPairsFeatures
extends Object

The list of features that can be used in a PairsTableCalculator

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
MergedPairsFeatures(FeatureList<FeatureInputPairObjects> pair)	Creates to only calculate pair features.
MergedPairsFeatures(FeatureList<FeatureInputStack> image, FeatureList<FeatureInputSingleObject> single, FeatureList<FeatureInputPairObjects> pair)	Creates with features for single, pair and image as a whole.

Method Summary

Modifier and Type	Method	Description
FeatureCalculatorMulti<FeatureInputStack>	createCalculator(org.anchoranalysis.image.feature.calculator.merged.CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, BoundReplaceStrategy<FeatureInputStack,? extends ReplaceStrategy<FeatureInputStack>> cachingStrategy)	Creates a feature calculator for stack features.
FeatureCalculatorMulti<FeatureInputPairObjects>	createPair(org.anchoranalysis.image.feature.calculator.merged.CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, CacheTransferSourceCollection cacheTransferSource)	Creates a feature calculator for pair object features.
FeatureCalculatorMulti<FeatureInputSingleObject>	createSingle(org.anchoranalysis.image.feature.calculator.merged.CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, BoundReplaceStrategy<FeatureInputSingleObject,CacheAndReuseStrategy<FeatureInputSingleObject>> cachingStrategy)	Creates a feature calculator for single object features.
MergedPairsFeatures	duplicate()	Creates a duplicate of this MergedPairsFeatures instance.
FeatureList<FeatureInputStack>	getImage()
FeatureList<FeatureInputPairObjects>	getPair()
FeatureList<FeatureInputSingleObject>	getSingle()
int	numberImageFeatures()	Gets the number of image features.
int	numberPairFeatures()	Gets the number of pair features.
int	numberSingleFeatures()	Gets the number of single object features.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

MergedPairsFeatures

public MergedPairsFeatures(FeatureList<FeatureInputPairObjects> pair)

Creates to only calculate pair features.

Parameters:

pair - features for a pair of objects

MergedPairsFeatures

public MergedPairsFeatures(FeatureList<FeatureInputStack> image, FeatureList<FeatureInputSingleObject> single, FeatureList<FeatureInputPairObjects> pair)

Creates with features for single, pair and image as a whole.

Parameters:

image - features for image as a whole

single - features for single-objects

pair - features for a pair of objects

Method Details

duplicate

public MergedPairsFeatures duplicate()

Creates a duplicate of this MergedPairsFeatures instance.

Returns:

A new MergedPairsFeatures object with duplicated feature lists

numberImageFeatures

public int numberImageFeatures()

Gets the number of image features.

Returns:

The number of features in the image feature list

numberSingleFeatures

public int numberSingleFeatures()

Gets the number of single object features.

Returns:

The number of features in the single object feature list

numberPairFeatures

public int numberPairFeatures()

Gets the number of pair features.

Returns:

The number of features in the pair feature list

createCalculator

public FeatureCalculatorMulti<FeatureInputStack> createCalculator(org.anchoranalysis.image.feature.calculator.merged.CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, BoundReplaceStrategy<FeatureInputStack,? extends ReplaceStrategy<FeatureInputStack>> cachingStrategy) throws InitializeException

Creates a feature calculator for stack features.

Parameters:

calculatorCreator - Helper for creating calculators

initialization - Image initialization parameters

cachingStrategy - Strategy for caching and replacing feature calculations

Returns:

A multi-feature calculator for stack features

Throws:

InitializeException - If initialization fails

createSingle

public FeatureCalculatorMulti<FeatureInputSingleObject> createSingle(org.anchoranalysis.image.feature.calculator.merged.CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, BoundReplaceStrategy<FeatureInputSingleObject,CacheAndReuseStrategy<FeatureInputSingleObject>> cachingStrategy) throws InitializeException

Creates a feature calculator for single object features.

Parameters:

calculatorCreator - Helper for creating calculators

initialization - Image initialization parameters

cachingStrategy - Strategy for caching and replacing feature calculations

Returns:

A multi-feature calculator for single object features

Throws:

InitializeException - If initialization fails

createPair

public FeatureCalculatorMulti<FeatureInputPairObjects> createPair(org.anchoranalysis.image.feature.calculator.merged.CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, CacheTransferSourceCollection cacheTransferSource) throws InitializeException

Creates a feature calculator for pair object features.

Parameters:

calculatorCreator - Helper for creating calculators

initialization - Image initialization parameters

cacheTransferSource - Collection of cache transfer sources

Returns:

A multi-feature calculator for pair object features

Throws:

InitializeException - If initialization fails

getImage

public FeatureList<FeatureInputStack> getImage()

getSingle

public FeatureList<FeatureInputSingleObject> getSingle()

getPair

public FeatureList<FeatureInputPairObjects> getPair()