Package org.anchoranalysis.image.inference.segment

Class ScaleAndThresholdVoxels

Object
org.anchoranalysis.image.inference.segment.ScaleAndThresholdVoxels
public class ScaleAndThresholdVoxels
extends Object
Scales the size of a Voxels<FloatBuffer> and then thresholds it.
Author:
Owen Feehan

  • Method Summary

    Modifier and Type Method Description
    static org.anchoranalysis.image.voxel.binary.BinaryVoxels<org.anchoranalysis.image.voxel.buffer.primitive.UnsignedByteBuffer> scaleAndThreshold​(org.anchoranalysis.image.voxel.Voxels<FloatBuffer> voxels, org.anchoranalysis.spatial.box.Extent targetSize, org.anchoranalysis.image.voxel.resizer.VoxelsResizer resizer, float maskMinValue)
    Scales voxels representing a mask to a target size, and then thresholds.

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

  • Method Details

    • scaleAndThreshold

      public static org.anchoranalysis.image.voxel.binary.BinaryVoxels<org.anchoranalysis.image.voxel.buffer.primitive.UnsignedByteBuffer> scaleAndThreshold​(org.anchoranalysis.image.voxel.Voxels<FloatBuffer> voxels, org.anchoranalysis.spatial.box.Extent targetSize, org.anchoranalysis.image.voxel.resizer.VoxelsResizer resizer, float maskMinValue)
      Scales voxels representing a mask to a target size, and then thresholds.
      Parameters:
      voxels - voxels before any scaling.
      targetSize - the desired size of the voxels after scaling.
      resizer - the interpolator to use for scaling.
      maskMinValue - the minimum voxel value to accept (and all above it) as on voxels in the mask.
      Returns:
      a mask, of size targetSize, corresponding to a scaled and thresholded voxels.