Package org.anchoranalysis.mpp.feature.addcriteria

Class AddCriteriaEnergyPair

Object

org.anchoranalysis.mpp.feature.addcriteria.AddCriteriaEnergyPair

All Implemented Interfaces:

AddCriteria<EnergyPair>, OrderedFeatureList<FeatureInputPairMemo>

public class AddCriteriaEnergyPair
extends Object
implements AddCriteria<EnergyPair>

Implements AddCriteria for energy pairs, combining energy calculations with additional criteria.

Constructor Summary

Constructors

Constructor	Description
AddCriteriaEnergyPair(FeatureList<FeatureInputPairMemo> energyPairs, AddCriteriaPair pairAddCriteria)	Creates an AddCriteriaEnergyPair with specified energy pairs and add criteria.

Method Summary

Modifier and Type	Method	Description
Optional<EnergyPair>	generateEdge(VoxelizedMarkMemo mark1, VoxelizedMarkMemo mark2, EnergyStack energyStack, Optional<FeatureCalculatorMulti<FeatureInputPairMemo>> session, boolean do3D)	Generates an edge between two marks based on the defined criteria.
Optional<FeatureList<FeatureInputPairMemo>>	orderedListOfFeatures()	Retrieves an ordered list of features used to determine the AddCriteria.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

AddCriteriaEnergyPair

public AddCriteriaEnergyPair(FeatureList<FeatureInputPairMemo> energyPairs, AddCriteriaPair pairAddCriteria) throws InitializeException

Creates an AddCriteriaEnergyPair with specified energy pairs and add criteria.

Parameters:

energyPairs - feature list for energy pair calculations

pairAddCriteria - criteria for adding mark pairs

Throws:

InitializeException - if initialization fails

Method Details

orderedListOfFeatures

public Optional<FeatureList<FeatureInputPairMemo>> orderedListOfFeatures() throws CreateException

Description copied from interface: OrderedFeatureList

Retrieves an ordered list of features used to determine the AddCriteria.

Specified by:

orderedListOfFeatures in interface OrderedFeatureList<FeatureInputPairMemo>

Returns:

an Optional containing a FeatureList of type T if relevant, or Optional.empty() if irrelevant

Throws:

CreateException - if an error occurs while creating the feature list

generateEdge

public Optional<EnergyPair> generateEdge(VoxelizedMarkMemo mark1, VoxelizedMarkMemo mark2, EnergyStack energyStack, Optional<FeatureCalculatorMulti<FeatureInputPairMemo>> session, boolean do3D) throws CreateException

Description copied from interface: AddCriteria

Generates an edge between two marks based on the defined criteria.

Specified by:

generateEdge in interface AddCriteria<EnergyPair>

Parameters:

mark1 - the first VoxelizedMarkMemo

mark2 - the second VoxelizedMarkMemo

energyStack - the EnergyStack containing image data and parameters

session - an optional FeatureCalculatorMulti for feature calculations

do3D - whether to perform 3D calculations

Returns:

an Optional containing the generated edge of type T if criteria are met, otherwise empty

Throws:

CreateException - if there's an error during edge generation