Uses of Class
org.anchoranalysis.mpp.feature.energy.marks.MarksWithEnergyBreakdown

Packages that use MarksWithEnergyBreakdown

Package	Description
org.anchoranalysis.mpp.feature.energy	Non-bean classes pertaining to calculating energy during an energy-minimization optimization scheme.
org.anchoranalysis.mpp.feature.energy.marks	Non-bean classes pertaining to calculating energy of {org.anchoranalysis.mpp.mark.Mark}s.

Uses of MarksWithEnergyBreakdown in org.anchoranalysis.mpp.feature.energy

Methods in org.anchoranalysis.mpp.feature.energy that return MarksWithEnergyBreakdown

Modifier and Type	Method	Description
MarksWithEnergyBreakdown	IndexableMarksWithEnergy.getMarks()	The marks with their energy breakdown.

Constructors in org.anchoranalysis.mpp.feature.energy with parameters of type MarksWithEnergyBreakdown

Constructor	Description
IndexableMarksWithEnergy(int iter, MarksWithEnergyBreakdown marks)	Creates a new IndexableMarksWithEnergy.

Uses of MarksWithEnergyBreakdown in org.anchoranalysis.mpp.feature.energy.marks

Methods in org.anchoranalysis.mpp.feature.energy.marks that return MarksWithEnergyBreakdown

Modifier and Type	Method	Description
MarksWithEnergyBreakdown	MarksWithEnergyBreakdown.deepCopy()	Creates a deep copy of this instance.
MarksWithEnergyBreakdown	MarksWithEnergyBreakdown.shallowCopy()	Creates a shallow copy of this instance.