Package org.anchoranalysis.plugin.image.feature.bean.dimensions

Class VoxelPhysicalSize<T extends org.anchoranalysis.feature.input.FeatureInputEnergy>

Object
org.anchoranalysis.bean.AnchorBean<B>
org.anchoranalysis.bean.initializable.InitializableBean<org.anchoranalysis.feature.bean.Feature<T>,​org.anchoranalysis.feature.initialization.FeatureInitialization>
org.anchoranalysis.feature.bean.Feature<T>
org.anchoranalysis.plugin.image.feature.bean.dimensions.FromDimensionsBase<T>
org.anchoranalysis.plugin.image.feature.bean.dimensions.ForSpecificAxis<T>
org.anchoranalysis.plugin.image.feature.bean.dimensions.VoxelPhysicalSize<T>
Type Parameters:
T - feature-input-type
public class VoxelPhysicalSize<T extends org.anchoranalysis.feature.input.FeatureInputEnergy>
extends ForSpecificAxis<T>
The physical size of a pixel in a specific dimension.
Author:
Owen Feehan

  • Constructor Summary

    Constructors 
    Constructor Description
    VoxelPhysicalSize()  

  • Method Summary

    Modifier and Type Method Description
    protected double calculateForAxis​(org.anchoranalysis.image.core.dimensions.Dimensions dimensions, org.anchoranalysis.spatial.axis.Axis axis)
    Calculates a feature value for a specific axis of the given dimensions.
    boolean isAcceptMissingResolution()
    Whether to throw an exception (if true) if image-resolution is missing, or return Double.Nan (if false).
    void setAcceptMissingResolution​(boolean acceptMissingResolution)
    Whether to throw an exception (if true) if image-resolution is missing, or return Double.Nan (if false).

    Methods inherited from class org.anchoranalysis.plugin.image.feature.bean.dimensions.ForSpecificAxis

    calculateFromDimensions, describeParameters, getAxis, setAxis

    Methods inherited from class org.anchoranalysis.plugin.image.feature.bean.dimensions.FromDimensionsBase

    calculate, inputType

    Methods inherited from class org.anchoranalysis.feature.bean.Feature

    assignTo, beforeCalc, calculateCheckInitialized, castAs, createListChildFeatures, describeBean, descriptionLong, duplicateChangeName, getCustomName, getFriendlyName, onInitialization, setCustomName, toString

    Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

    getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized

    Methods inherited from class org.anchoranalysis.bean.AnchorBean

    checkMisconfigured, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

  • Constructor Details

  • Method Details

    • calculateForAxis

      protected double calculateForAxis​(org.anchoranalysis.image.core.dimensions.Dimensions dimensions, org.anchoranalysis.spatial.axis.Axis axis) throws org.anchoranalysis.feature.calculate.FeatureCalculationException
      Description copied from class: ForSpecificAxis
      Calculates a feature value for a specific axis of the given dimensions.
      Specified by:
      calculateForAxis in class ForSpecificAxis<T extends org.anchoranalysis.feature.input.FeatureInputEnergy>
      Parameters:
      dimensions - the Dimensions to calculate from
      axis - the Axis to perform the calculation on
      Returns:
      the calculated feature value
      Throws:
      org.anchoranalysis.feature.calculate.FeatureCalculationException - if the calculation fails

    • isAcceptMissingResolution

      public boolean isAcceptMissingResolution()
      Whether to throw an exception (if true) if image-resolution is missing, or return Double.Nan (if false).

    • setAcceptMissingResolution

      public void setAcceptMissingResolution​(boolean acceptMissingResolution)
      Whether to throw an exception (if true) if image-resolution is missing, or return Double.Nan (if false).