Package org.anchoranalysis.plugin.image.feature.bean.stack.object

Class QuantileAcrossConnectedComponents

Object
org.anchoranalysis.bean.AnchorBean<B>
org.anchoranalysis.bean.initializable.InitializableBean<org.anchoranalysis.feature.bean.Feature<T>,​org.anchoranalysis.feature.initialization.FeatureInitialization>
org.anchoranalysis.feature.bean.Feature<org.anchoranalysis.image.feature.input.FeatureInputStack>
org.anchoranalysis.image.feature.bean.FeatureStack
org.anchoranalysis.plugin.image.feature.bean.stack.object.QuantileAcrossConnectedComponents
public class QuantileAcrossConnectedComponents
extends org.anchoranalysis.image.feature.bean.FeatureStack
Calculates the median of a feature applied to each connected component

  • Constructor Summary

    Constructors 
    Constructor Description
    QuantileAcrossConnectedComponents()  

  • Method Summary

    Modifier and Type Method Description
    double calculate​(org.anchoranalysis.feature.calculate.FeatureCalculationInput<org.anchoranalysis.image.feature.input.FeatureInputStack> input)  
    int getEnergyChannelIndex()  
    org.anchoranalysis.feature.bean.Feature<org.anchoranalysis.image.feature.input.FeatureInputSingleObject> getItem()  
    double getQuantile()  
    void setEnergyChannelIndex​(int energyChannelIndex)  
    void setItem​(org.anchoranalysis.feature.bean.Feature<org.anchoranalysis.image.feature.input.FeatureInputSingleObject> item)  
    void setQuantile​(double quantile)  

    Methods inherited from class org.anchoranalysis.image.feature.bean.FeatureStack

    inputType

    Methods inherited from class org.anchoranalysis.feature.bean.Feature

    assignTo, beforeCalc, calculateCheckInitialized, castAs, createListChildFeatures, describeBean, describeParameters, descriptionLong, duplicateChangeName, getCustomName, getFriendlyName, onInitialization, setCustomName, toString

    Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

    getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized

    Methods inherited from class org.anchoranalysis.bean.AnchorBean

    checkMisconfigured, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

  • Constructor Details

  • Method Details

    • calculate

      public double calculate​(org.anchoranalysis.feature.calculate.FeatureCalculationInput<org.anchoranalysis.image.feature.input.FeatureInputStack> input) throws org.anchoranalysis.feature.calculate.FeatureCalculationException
      Specified by:
      calculate in class org.anchoranalysis.feature.bean.Feature<org.anchoranalysis.image.feature.input.FeatureInputStack>
      Throws:
      org.anchoranalysis.feature.calculate.FeatureCalculationException

    • getItem

      public org.anchoranalysis.feature.bean.Feature<org.anchoranalysis.image.feature.input.FeatureInputSingleObject> getItem()

    • setItem

      public void setItem​(org.anchoranalysis.feature.bean.Feature<org.anchoranalysis.image.feature.input.FeatureInputSingleObject> item)

    • getEnergyChannelIndex

      public int getEnergyChannelIndex()

    • setEnergyChannelIndex

      public void setEnergyChannelIndex​(int energyChannelIndex)

    • getQuantile

      public double getQuantile()

    • setQuantile

      public void setQuantile​(double quantile)