Class SingleChannel

Object
AnchorBean<VoxelScore>
InitializableBean<VoxelScore, ImageInitialization>
ImageBean<VoxelScore>
VoxelScore
SingleChannel
Direct Known Subclasses:
CalculateLevelBase, FromDictionaryBase, NormalizeByConstant, NormalizeByMax
public abstract class SingleChannel extends VoxelScore
A score that is calculated on a single channel only.

This abstract class extends VoxelScore to provide a base for voxel scores that operate on a single energy channel.

Author:
Owen Feehan

  • Constructor Summary

    Constructors
    Constructor
    Description
    SingleChannel()
     

  • Method Summary

    Modifier and Type
    Method
    Description
    double
    calculate(int[] voxelIntensities)
     
    protected abstract double
    deriveScoreFromVoxel(int voxelIntensity)
    Derives a score from a single voxel intensity.
    int
    getEnergyChannelIndex()
    The index of the energy channel to use for score calculation.
    void
    setEnergyChannelIndex(int energyChannelIndex)
    The index of the energy channel to use for score calculation.

    Methods inherited from class org.anchoranalysis.image.feature.bean.VoxelScore

    initialize

    Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

    getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

    Methods inherited from class org.anchoranalysis.bean.AnchorBean

    checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

  • Constructor Details

    • SingleChannel

      public SingleChannel()

  • Method Details

    • calculate

      public double calculate(int[] voxelIntensities) throws FeatureCalculationException
      Specified by:
      calculate in class VoxelScore
      Throws:
      FeatureCalculationException

    • deriveScoreFromVoxel

      protected abstract double deriveScoreFromVoxel(int voxelIntensity)
      Derives a score from a single voxel intensity.
      Parameters:
      voxelIntensity - the intensity of the voxel in the specified energy channel
      Returns:
      the calculated score for the voxel

    • getEnergyChannelIndex

      public int getEnergyChannelIndex()
      The index of the energy channel to use for score calculation.

    • setEnergyChannelIndex

      public void setEnergyChannelIndex(int energyChannelIndex)
      The index of the energy channel to use for score calculation.