Class Intensity

Object
AnchorBean<Feature<FeatureInputStack>>
InitializableBean<Feature<FeatureInputStack>, FeatureInitialization>
Feature<FeatureInputStack>
FeatureStack
Intensity
public class Intensity extends FeatureStack
The intensity of a particular channel of the stack, by default the mean-intensity.

Alternative statistics to the mean can be calculated via the item bean-field.

Author:
Owen Feehan

  • Constructor Summary

    Constructors
    Constructor
    Description
    Intensity()
     

  • Method Summary

    Modifier and Type
    Method
    Description
    protected double
    calculate(FeatureCalculationInput<FeatureInputStack> input)
     
    String
    descriptionLong()
     
    int
    getEnergyIndex()
    The channel that that forms the histogram.
    int
    getEnergyIndexMask()
    Optionally, index of another channel that masks the histogram.
    Feature<FeatureInputHistogram>
    getItem()
    Feature to apply to the histogram.
    void
    setEnergyIndex(int energyIndex)
    The channel that that forms the histogram.
    void
    setEnergyIndexMask(int energyIndexMask)
    Optionally, index of another channel that masks the histogram.
    void
    setItem(Feature<FeatureInputHistogram> item)
    Feature to apply to the histogram.

    Methods inherited from class org.anchoranalysis.image.feature.bean.FeatureStack

    inputType

    Methods inherited from class org.anchoranalysis.feature.bean.Feature

    assignTo, beforeCalc, calculateCheckInitialized, castAs, createListChildFeatures, describeBean, describeParameters, duplicateChangeName, getCustomName, getFriendlyName, onInitialization, setCustomName, toString

    Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

    getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized

    Methods inherited from class org.anchoranalysis.bean.AnchorBean

    checkMisconfigured, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

  • Constructor Details

    • Intensity

      public Intensity()

  • Method Details

    • calculate

      protected double calculate(FeatureCalculationInput<FeatureInputStack> input) throws FeatureCalculationException
      Specified by:
      calculate in class Feature<FeatureInputStack>
      Throws:
      FeatureCalculationException

    • descriptionLong

      public String descriptionLong()
      Overrides:
      descriptionLong in class Feature<FeatureInputStack>

    • getItem

      public Feature<FeatureInputHistogram> getItem()
      Feature to apply to the histogram.

    • setItem

      public void setItem(Feature<FeatureInputHistogram> item)
      Feature to apply to the histogram.

    • getEnergyIndex

      public int getEnergyIndex()
      The channel that that forms the histogram.

    • setEnergyIndex

      public void setEnergyIndex(int energyIndex)
      The channel that that forms the histogram.

    • getEnergyIndexMask

      public int getEnergyIndexMask()
      Optionally, index of another channel that masks the histogram. -1 disables.

    • setEnergyIndexMask

      public void setEnergyIndexMask(int energyIndexMask)
      Optionally, index of another channel that masks the histogram. -1 disables.