Package org.anchoranalysis.plugin.image.task.bean.grouped.selectchannels

Class All

Object
org.anchoranalysis.bean.AnchorBean<FromStacks>
org.anchoranalysis.plugin.image.task.bean.grouped.selectchannels.FromStacks
org.anchoranalysis.plugin.image.task.bean.grouped.selectchannels.All
public class All
extends FromStacks
Selects all possible channels from all possible stacks

If a stack has a single-channel, it it uses this name as an output If a stack has multiple channels, this name is used but suffixed with a number of each channel (00, 01 etc.)

Author:
Owen Feehan

  • Constructor Summary

    Constructors 
    Constructor Description
    All()  

  • Method Summary

    Modifier and Type Method Description
    NamedChannels selectChannels​(ChannelSource source, boolean checkType)
    Takes a stack-collection and extracts a set of references to particular channels (each with a name).

    Methods inherited from class org.anchoranalysis.bean.AnchorBean

    checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

  • Constructor Details

    • All

      public All()

  • Method Details

    • selectChannels

      public NamedChannels selectChannels​(ChannelSource source, boolean checkType) throws org.anchoranalysis.core.exception.OperationFailedException
      Description copied from class: FromStacks
      Takes a stack-collection and extracts a set of references to particular channels (each with a name).
      Specified by:
      selectChannels in class FromStacks
      Parameters:
      source - the ChannelSource containing the stacks to select from
      checkType - whether to check the type of the channels
      Returns:
      a NamedChannels object containing the selected channels
      Throws:
      org.anchoranalysis.core.exception.OperationFailedException - if the channel selection operation fails