Package org.anchoranalysis.plugin.image.task.bean.grouped.selectchannels

Class SpecificAndRename

Object

org.anchoranalysis.bean.AnchorBean<FromStacks>

org.anchoranalysis.plugin.image.task.bean.grouped.selectchannels.FromStacks

org.anchoranalysis.plugin.image.task.bean.grouped.selectchannels.SpecificAndRename

public class SpecificAndRename
extends FromStacks

Selects a specific set of channels from stacks, each identified by a stack-name and channel index

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
SpecificAndRename()

Method Summary

Modifier and Type	Method	Description
List<org.anchoranalysis.bean.NamedBean<FromStack>>	getList()
NamedChannels	selectChannels(ChannelSource source, boolean checkType)	Takes a stack-collection and extracts a set of references to particular channels (each with a name).
void	setList(List<org.anchoranalysis.bean.NamedBean<FromStack>> list)

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

SpecificAndRename

public SpecificAndRename()

Method Details

selectChannels

public NamedChannels selectChannels(ChannelSource source, boolean checkType) throws org.anchoranalysis.core.exception.OperationFailedException

Description copied from class: FromStacks

Takes a stack-collection and extracts a set of references to particular channels (each with a name).

Specified by:

selectChannels in class FromStacks

Parameters:

source - the ChannelSource containing the stacks to select from

checkType - whether to check the type of the channels

Returns:

a NamedChannels object containing the selected channels

Throws:

org.anchoranalysis.core.exception.OperationFailedException - if the channel selection operation fails

getList

public List<org.anchoranalysis.bean.NamedBean<FromStack>> getList()

setList

public void setList(List<org.anchoranalysis.bean.NamedBean<FromStack>> list)