Package org.anchoranalysis.plugin.image.task.feature.calculator

Class CalculateFeaturesForObjects<T extends org.anchoranalysis.feature.input.FeatureInput>

Object

org.anchoranalysis.plugin.image.task.feature.calculator.CalculateFeaturesForObjects<T>

Type Parameters:

T - the type of feature input

public class CalculateFeaturesForObjects<T extends org.anchoranalysis.feature.input.FeatureInput>
extends Object

Calculates features for objects and stores the results.

Constructor Summary

Constructors

Constructor	Description
CalculateFeaturesForObjects(CombineObjectsForFeatures<T> table, InitializationWithEnergyStack initialization, boolean suppressErrors, FeatureCalculationContext<org.anchoranalysis.image.feature.calculator.FeatureTableCalculator<T>> context)	Creates a new CalculateFeaturesForObjects.

Method Summary

Modifier and Type	Method	Description
void	calculateForObjects(org.anchoranalysis.image.bean.provider.ObjectCollectionProvider provider, LabelsForInput labelsForInput)	Calculates features for objects provided by a ObjectCollectionProvider.
void	calculateForObjects(org.anchoranalysis.image.voxel.object.ObjectCollection objects, org.anchoranalysis.feature.energy.EnergyStack energyStack, LabelsForInput labelsForInput)	Calculates the feature-results for objects, and stores the results.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

CalculateFeaturesForObjects

public CalculateFeaturesForObjects(CombineObjectsForFeatures<T> table, InitializationWithEnergyStack initialization, boolean suppressErrors, FeatureCalculationContext<org.anchoranalysis.image.feature.calculator.FeatureTableCalculator<T>> context) throws org.anchoranalysis.core.exception.OperationFailedException

Creates a new CalculateFeaturesForObjects.

Parameters:

table - combines objects for feature calculation

initialization - initialization with energy stack

suppressErrors - if true, errors are suppressed and logged

context - context for feature calculation

Throws:

org.anchoranalysis.core.exception.OperationFailedException - if the calculator cannot be started

Method Details

calculateForObjects

public void calculateForObjects(org.anchoranalysis.image.bean.provider.ObjectCollectionProvider provider, LabelsForInput labelsForInput) throws org.anchoranalysis.core.exception.OperationFailedException

Calculates features for objects provided by a ObjectCollectionProvider.

Parameters:

provider - provides the object collection

labelsForInput - how to assign labels to the input

Throws:

org.anchoranalysis.core.exception.OperationFailedException - if the operation fails

calculateForObjects

public void calculateForObjects(org.anchoranalysis.image.voxel.object.ObjectCollection objects, org.anchoranalysis.feature.energy.EnergyStack energyStack, LabelsForInput labelsForInput) throws org.anchoranalysis.core.exception.OperationFailedException

Calculates the feature-results for objects, and stores the results.

Parameters:

objects - the objects to calculate features for

energyStack - the energy-stack

labelsForInput - how to assign labels to the input

Throws:

org.anchoranalysis.core.exception.OperationFailedException - if the operation cannot be completed, but not if a particular feature calculation fails