All Packages
Package Summary
Package
Description
Filters that perform blurring.
Implementations of
ConvertChannelTo and ConvertChannelToWithHistogram.Implementations of
ConvertChannelTo and ConvertChannelToWithHistogram.Implementations of
ChannelProvider that are
generic base-classes or otherwise abstract or general.Implementations of
ChannelProvider that perform
arithmetic on voxels in one or more Channels.Implementations of
ChannelProvider that sets the
values of the voxels in a Channel.Implementations of
ChannelProvider that converts a
Channel from one voxel-type to another.Implementations of
ChannelProvider that calculate
the gradient of a Channel's voxels in one or more
dimensions.Implementations of
ChannelProvider that manipulate
the intensity-values of the voxels of a Channel's
voxels.Implementations of
ChannelProvider that involve
conversion from or application of Masks.Implementations of
ChannelProvider that involve
conversion from or application of ObjectMasks.Implementations of
ChannelProvider that assign a
score to particular subregions of a channel.Implementations of
ChannelProvider that process 3D
channels slice-by-slice.Implementations of
ColorProvider.Beans pertaining to
Dictionary.Implementations of
DimensionsProvider.Implementations of
HistogramProvider.Thresholding of intensity values represented in at
Histogram.Implementations of
MaskProvider.Implementations of
MaskProvider that combine
existing providers.Implementations of
MaskProvider that convert
providers of other types to ObjectMasks.Implementations of
MaskProvider that implement
morphological operations.Provides if-else conditions to a
MaskProvider.Implementations of
MaskProvider where an ObjectCollection is created by segmenting a Channel.Implementations of
MaskProvider that process 3D
masks slice-by-slice.Implementations of
ObjectFilter.Implementations of
ObjectFilter that assess each
element in a collection collectively.Implementations of
ObjectFilter that combine two or
more other ObjectFilters.Implementations of
ObjectFilter that
independently assess each element in a collection.Implementations of
ObjectMatcher.Implementations of
ObjectCollectionProvider.Implementations of
ObjectCollectionProvider
involving connected-components.Implementations of
ObjectCollectionProvider
involving feature calculation.Implementations of
ObjectCollectionProvider that
filter objects.Implementations of
ObjectCollectionProvider
involving a Mask.Implementations of
ObjectCollectionProvider
involving merging objects together.Implementations of
ObjectCollectionProvider
involving morphological operations.Implementations of
ObjectCollectionProvider
involving segmentation.Implementations of
ObjectCollectionProvider
involving z-slice processing.Implementations of
ObjectCollectionProvider
involving splitting objects into smaller objects.Implementations of
SegmentChannelIntoObjects.Minima imposition for a Watershed transformation.
org.anchoranalysis.plugin.image.bean.object.segment.channel.watershed.minima.grayscalereconstruction
Grayscale reconstruction to support the Watershed transformation.
Implementation of a Watershed transformation
based on Yeong et al.
Strategies for reducing the number of elements with a list by merging/removing lower-confidence
elements that overlap.
Implementations of
ScaleCalculator for calculating
a scaling-factor from dimensions.Implementations of
BinarySegmentation.Implementations of
StackProvider.Implementations of
StackProvider that color
portions of an image.Implementations of
ThumbnailFromObjects.Implementations of
ThumbnailFromStack.Non-beans for operations or calculations relating to
Channels.Non-bean for operations or calculations relating to intensity.
Non-beans for calculating a thresholding level from itensity values.
Non-beans pertaining to
ObjectMasks.Merging
ObjectMasks.Conditions for merging
ObjectMasks.Assigning priority when merging
ObjectMasks.Non-bean classes pertaining to
Providers.Non-beans pertaining to segmenting a z-stack slice-by-slice.
Encoding voxels in a watershed-transformation implementation.
Non-bean classes for thumbnail creation.