Class FromMaskBase

Object
AnchorBean<ChannelProvider>
InitializableBean<ChannelProvider, ImageInitialization>
ImageBean<ChannelProvider>
BeanProviderAsStackBase<ChannelProvider, Channel>
ChannelProvider
FromMaskBase
All Implemented Interfaces:
Provider<Channel>, ProviderAsStack
Direct Known Subclasses:
FromMask
public abstract class FromMaskBase extends ChannelProvider
A base class for a ChannelProvider which also uses a binary-mask, but which doesn't use any other ChannelProvider as an input.

Note for classes that use both a binary-mask AND another ChannelProvider, see UnaryWithMaskBase.

Author:
Owen Feehan

  • Constructor Summary

    Constructors
    Constructor
    Description
    FromMaskBase()
     

  • Method Summary

    Modifier and Type
    Method
    Description
    protected abstract Channel
    createFromMask(Mask mask)
    Creates a Channel from the provided Mask.
    Channel
    get()
     
    MaskProvider
    getMask()
    The MaskProvider used to create the binary mask.
    void
    setMask(MaskProvider mask)
    The MaskProvider used to create the binary mask.

    Methods inherited from class org.anchoranalysis.image.bean.provider.ChannelProvider

    getAsStack

    Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

    getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

    Methods inherited from class org.anchoranalysis.bean.AnchorBean

    checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

  • Constructor Details

    • FromMaskBase

      public FromMaskBase()

  • Method Details

    • get

      public Channel get() throws ProvisionFailedException
      Throws:
      ProvisionFailedException

    • createFromMask

      protected abstract Channel createFromMask(Mask mask) throws ProvisionFailedException
      Creates a Channel from the provided Mask.
      Parameters:
      mask - the Mask to create the channel from
      Returns:
      the created Channel
      Throws:
      ProvisionFailedException - if the channel creation fails

    • getMask

      public MaskProvider getMask()
      The MaskProvider used to create the binary mask.

    • setMask

      public void setMask(MaskProvider mask)
      The MaskProvider used to create the binary mask.