Class ExtendInZ

Object
AnchorBean<ObjectCollectionProvider>
InitializableBean<ObjectCollectionProvider, ImageInitialization>
ImageBean<ObjectCollectionProvider>
ObjectCollectionProvider
ObjectCollectionProviderUnary
WithDimensionsBase
ExtendInZ
All Implemented Interfaces:
Provider<ObjectCollection>
public class ExtendInZ extends WithDimensionsBase
Creates a 3D version of an object by replicating each input-object across the z-dimension to meet (3D) dimensions.

An object-collection is produced with an identical number of objects, but with each expanded in the z-dimension.

If the input-object is a 2D-slice it is replicated directly, if it is already a 3D-object its flattened version (a maximum intensity projection) is used.

Author:
Owen Feehan

  • Constructor Summary

    Constructors
    Constructor
    Description
    ExtendInZ()
     

  • Method Summary

    Modifier and Type
    Method
    Description
    ObjectCollection
    createFromObjects(ObjectCollection objects)
     

    Methods inherited from class org.anchoranalysis.plugin.image.bean.object.provider.WithDimensionsBase

    createDimensions, getDimensions, setDimensions

    Methods inherited from class org.anchoranalysis.image.bean.provider.ObjectCollectionProviderUnary

    get, getObjects, setObjects

    Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

    getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

    Methods inherited from class org.anchoranalysis.bean.AnchorBean

    checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

  • Constructor Details

    • ExtendInZ

      public ExtendInZ()

  • Method Details

    • createFromObjects

      public ObjectCollection createFromObjects(ObjectCollection objects) throws ProvisionFailedException
      Specified by:
      createFromObjects in class ObjectCollectionProviderUnary
      Throws:
      ProvisionFailedException