Class ImposeMinima

Object
AnchorBean<SegmentChannelIntoObjects>
InitializableBean<SegmentChannelIntoObjects, ImageInitialization>
ImageBean<SegmentChannelIntoObjects>
SegmentationBean<SegmentChannelIntoObjects>
SegmentChannelIntoObjects
SegmentChannelIntoObjectsUnary
ImposeMinima
public class ImposeMinima extends SegmentChannelIntoObjectsUnary
Imposes minima in seed locations on the input-channel before performing the segmentation
Author:
Owen Feehan

  • Constructor Summary

    Constructors
    Constructor
    Description
    ImposeMinima()
     

  • Method Summary

    Modifier and Type
    Method
    Description
    MinimaImposition
    getMinimaImposition()
     
    ObjectCollection
    segment(Channel channel, Optional<ObjectMask> objectMask, Optional<ObjectCollection> seeds, SegmentChannelIntoObjects upstreamSegmenter)
     
    void
    setMinimaImposition(MinimaImposition minimaImposition)
     

    Methods inherited from class org.anchoranalysis.image.bean.segment.object.SegmentChannelIntoObjectsUnary

    getSegment, segment, setSegment

    Methods inherited from class org.anchoranalysis.image.bean.segment.object.SegmentChannelIntoObjects

    checkUnsupported3D, checkUnsupportedObjectMask, checkUnsupportedSeeds

    Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

    getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

    Methods inherited from class org.anchoranalysis.bean.AnchorBean

    checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

  • Constructor Details

    • ImposeMinima

      public ImposeMinima()

  • Method Details

    • segment

      public ObjectCollection segment(Channel channel, Optional<ObjectMask> objectMask, Optional<ObjectCollection> seeds, SegmentChannelIntoObjects upstreamSegmenter) throws SegmentationFailedException
      Specified by:
      segment in class SegmentChannelIntoObjectsUnary
      Throws:
      SegmentationFailedException

    • getMinimaImposition

      public MinimaImposition getMinimaImposition()

    • setMinimaImposition

      public void setMinimaImposition(MinimaImposition minimaImposition)