Package org.anchoranalysis.plugin.io.bean.input.channel

Class NamedChannels

Object
org.anchoranalysis.bean.AnchorBean<org.anchoranalysis.io.input.bean.InputManager<T>>
org.anchoranalysis.io.input.bean.InputManager<T>
org.anchoranalysis.image.io.bean.stack.reader.InputManagerWithStackReader<org.anchoranalysis.image.io.channel.input.NamedChannelsInputPart>
org.anchoranalysis.plugin.io.bean.input.channel.NamedChannelsBase
org.anchoranalysis.plugin.io.bean.input.channel.NamedChannels
public class NamedChannels
extends NamedChannelsBase
An image viewed as a set of channels, each with a unique name.
Author:
Owen Feehan

  • Constructor Summary

    Constructors 
    Constructor Description
    NamedChannels()  

  • Method Summary

    Modifier and Type Method Description
    org.anchoranalysis.image.io.bean.channel.ChannelMapCreator getChannelMap()  
    org.anchoranalysis.io.input.bean.InputManager<org.anchoranalysis.io.input.file.FileInput> getFileInput()  
    org.anchoranalysis.io.input.InputsWithDirectory<org.anchoranalysis.image.io.channel.input.NamedChannelsInputPart> inputs​(org.anchoranalysis.io.input.bean.InputManagerParameters parameters)  
    boolean isUseLastSeriesIndexOnly()  
    void setChannelMap​(org.anchoranalysis.image.io.bean.channel.ChannelMapCreator channelMap)  
    void setFileInput​(org.anchoranalysis.io.input.bean.InputManager<org.anchoranalysis.io.input.file.FileInput> fileInput)  
    void setUseLastSeriesIndexOnly​(boolean useLastSeriesIndexOnly)  

    Methods inherited from class org.anchoranalysis.image.io.bean.stack.reader.InputManagerWithStackReader

    getStackReader, setStackReader

    Methods inherited from class org.anchoranalysis.bean.AnchorBean

    checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

  • Constructor Details

  • Method Details

    • inputs

      public org.anchoranalysis.io.input.InputsWithDirectory<org.anchoranalysis.image.io.channel.input.NamedChannelsInputPart> inputs​(org.anchoranalysis.io.input.bean.InputManagerParameters parameters) throws org.anchoranalysis.io.input.InputReadFailedException
      Specified by:
      inputs in class org.anchoranalysis.io.input.bean.InputManager<org.anchoranalysis.image.io.channel.input.NamedChannelsInputPart>
      Throws:
      org.anchoranalysis.io.input.InputReadFailedException

    • getFileInput

      public org.anchoranalysis.io.input.bean.InputManager<org.anchoranalysis.io.input.file.FileInput> getFileInput()

    • setFileInput

      public void setFileInput​(org.anchoranalysis.io.input.bean.InputManager<org.anchoranalysis.io.input.file.FileInput> fileInput)

    • getChannelMap

      public org.anchoranalysis.image.io.bean.channel.ChannelMapCreator getChannelMap()

    • setChannelMap

      public void setChannelMap​(org.anchoranalysis.image.io.bean.channel.ChannelMapCreator channelMap)

    • isUseLastSeriesIndexOnly

      public boolean isUseLastSeriesIndexOnly()

    • setUseLastSeriesIndexOnly

      public void setUseLastSeriesIndexOnly​(boolean useLastSeriesIndexOnly)