Package org.anchoranalysis.plugin.io.bean.input.stack

Class ConvertNamedChannelsToStack

Object
org.anchoranalysis.bean.AnchorBean<org.anchoranalysis.io.input.bean.InputManager<T>>
org.anchoranalysis.io.input.bean.InputManager<org.anchoranalysis.image.io.stack.input.StackSequenceInput>
org.anchoranalysis.plugin.io.bean.input.stack.ConvertNamedChannelsToStack
public class ConvertNamedChannelsToStack
extends org.anchoranalysis.io.input.bean.InputManager<org.anchoranalysis.image.io.stack.input.StackSequenceInput>
Manager that converts (one channel) NamedChannelsInput to StackSequenceInput.
Author:
Owen Feehan

  • Constructor Summary

    Constructors 
    Constructor Description
    ConvertNamedChannelsToStack()  

  • Method Summary

    Modifier and Type Method Description
    String getChannelName()
    By default all channels are converted into a stack.
    org.anchoranalysis.io.input.bean.InputManager<org.anchoranalysis.image.io.channel.input.NamedChannelsInput> getInput()  
    int getTimeIndex()  
    org.anchoranalysis.io.input.InputsWithDirectory<org.anchoranalysis.image.io.stack.input.StackSequenceInput> inputs​(org.anchoranalysis.io.input.bean.InputManagerParameters parameters)  
    void setChannelName​(String channelName)
    By default all channels are converted into a stack.
    void setInput​(org.anchoranalysis.io.input.bean.InputManager<org.anchoranalysis.image.io.channel.input.NamedChannelsInput> input)  
    void setTimeIndex​(int timeIndex)  

    Methods inherited from class org.anchoranalysis.bean.AnchorBean

    checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

  • Constructor Details

  • Method Details

    • inputs

      public org.anchoranalysis.io.input.InputsWithDirectory<org.anchoranalysis.image.io.stack.input.StackSequenceInput> inputs​(org.anchoranalysis.io.input.bean.InputManagerParameters parameters) throws org.anchoranalysis.io.input.InputReadFailedException
      Specified by:
      inputs in class org.anchoranalysis.io.input.bean.InputManager<org.anchoranalysis.image.io.stack.input.StackSequenceInput>
      Throws:
      org.anchoranalysis.io.input.InputReadFailedException

    • getInput

      public org.anchoranalysis.io.input.bean.InputManager<org.anchoranalysis.image.io.channel.input.NamedChannelsInput> getInput()

    • setInput

      public void setInput​(org.anchoranalysis.io.input.bean.InputManager<org.anchoranalysis.image.io.channel.input.NamedChannelsInput> input)

    • getChannelName

      public String getChannelName()
      By default all channels are converted into a stack. If non-empty, only this channel is converted into a stack.

    • setChannelName

      public void setChannelName​(String channelName)
      By default all channels are converted into a stack. If non-empty, only this channel is converted into a stack.

    • getTimeIndex

      public int getTimeIndex()

    • setTimeIndex

      public void setTimeIndex​(int timeIndex)