Class ImposeResolution

Object
AnchorBean<StackReader>
StackReader
ImposeResolution
public class ImposeResolution extends StackReader
Adds an explicit Resolution to an image after it has been read.

Any existing Resolution associated with the image is replaced.

Author:
Owen Feehan

  • Constructor Summary

    Constructors
    Constructor
    Description
    ImposeResolution()
     

  • Method Summary

    Modifier and Type
    Method
    Description
    double
    getDepth()
    Physical pixel size of a voxel in z-dimension.
    double
    getHeight()
    Physical pixel size of a voxel in y-dimension.
    StackReader
    getStackReader()
    Reads an image before a resolution is imposed.
    double
    getWidth()
    Physical pixel size of a voxel in x-dimension.
    boolean
    isKeepZ()
    Keep the z-resolution if it is already defined
    OpenedImageFile
    openFile(Path path, ExecutionTimeRecorder executionTimeRecorder)
     
    void
    setDepth(double depth)
    Physical pixel size of a voxel in z-dimension.
    void
    setHeight(double height)
    Physical pixel size of a voxel in y-dimension.
    void
    setKeepZ(boolean keepZ)
    Keep the z-resolution if it is already defined
    void
    setStackReader(StackReader stackReader)
    Reads an image before a resolution is imposed.
    void
    setWidth(double width)
    Physical pixel size of a voxel in x-dimension.

    Methods inherited from class org.anchoranalysis.image.io.bean.stack.reader.StackReader

    readStack

    Methods inherited from class org.anchoranalysis.bean.AnchorBean

    checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

  • Constructor Details

    • ImposeResolution

      public ImposeResolution()

  • Method Details

    • openFile

      public OpenedImageFile openFile(Path path, ExecutionTimeRecorder executionTimeRecorder) throws ImageIOException
      Specified by:
      openFile in class StackReader
      Throws:
      ImageIOException

    • getStackReader

      public StackReader getStackReader()
      Reads an image before a resolution is imposed.

    • setStackReader

      public void setStackReader(StackReader stackReader)
      Reads an image before a resolution is imposed.

    • getWidth

      public double getWidth()
      Physical pixel size of a voxel in x-dimension.

    • setWidth

      public void setWidth(double width)
      Physical pixel size of a voxel in x-dimension.

    • getHeight

      public double getHeight()
      Physical pixel size of a voxel in y-dimension.

    • setHeight

      public void setHeight(double height)
      Physical pixel size of a voxel in y-dimension.

    • getDepth

      public double getDepth()
      Physical pixel size of a voxel in z-dimension.

    • setDepth

      public void setDepth(double depth)
      Physical pixel size of a voxel in z-dimension.

    • isKeepZ

      public boolean isKeepZ()
      Keep the z-resolution if it is already defined

    • setKeepZ

      public void setKeepZ(boolean keepZ)
      Keep the z-resolution if it is already defined