Class OpenedMultiFile

Object

OpenedMultiFile

All Implemented Interfaces:

AutoCloseable, OpenedImageFile

public class OpenedMultiFile
extends Object
implements OpenedImageFile

A OpenedImageFile where the image is formed from more than one file on the file-system.

It ignores multiple series.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
OpenedMultiFile(StackReader stackReader, ParsedFilePathBag fileBag, ExecutionTimeRecorder executionTimeRecorder)

Method Summary

Modifier and Type	Method	Description
int	bitDepth(Logger logger)
Optional<List<String>>	channelNames(Logger logger)
void	close()
Dimensions	dimensionsForSeries(int seriesIndex, Logger logger)
boolean	isRGB(Logger logger)
Optional<ImageLocation>	location()
int	numberChannels(Logger logger)
int	numberFrames(Logger logger)
int	numberSeries()
TimeSeries	open(int seriesIndex, Logger logger)
Optional<ImagePyramidMetadata>	pyramid()
ImageTimestampsAttributes	timestamps()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.anchoranalysis.image.io.stack.input.OpenedImageFile

metadata, open, openCheckType

Constructor Details

OpenedMultiFile

public OpenedMultiFile(StackReader stackReader,
 ParsedFilePathBag fileBag,
 ExecutionTimeRecorder executionTimeRecorder)

Method Details

numberSeries

public int numberSeries()

Specified by:

numberSeries in interface OpenedImageFile

open

public TimeSeries open(int seriesIndex,
 Logger logger)
                throws ImageIOException

Specified by:

open in interface OpenedImageFile

Throws:

ImageIOException

channelNames

public Optional<List<String>> channelNames(Logger logger)

Specified by:

channelNames in interface OpenedImageFile

numberChannels

public int numberChannels(Logger logger)
                   throws ImageIOException

Specified by:

numberChannels in interface OpenedImageFile

Throws:

ImageIOException

bitDepth

public int bitDepth(Logger logger)
             throws ImageIOException

Specified by:

bitDepth in interface OpenedImageFile

Throws:

ImageIOException

isRGB

public boolean isRGB(Logger logger)
              throws ImageIOException

Specified by:

isRGB in interface OpenedImageFile

Throws:

ImageIOException

numberFrames

public int numberFrames(Logger logger)
                 throws ImageIOException

Specified by:

numberFrames in interface OpenedImageFile

Throws:

ImageIOException

timestamps

public ImageTimestampsAttributes timestamps()
                                     throws ImageIOException

Specified by:

timestamps in interface OpenedImageFile

Throws:

ImageIOException

location

public Optional<ImageLocation> location()
                                 throws ImageIOException

Specified by:

location in interface OpenedImageFile

Throws:

ImageIOException

close

public void close()
           throws ImageIOException

Specified by:

close in interface AutoCloseable

Specified by:

close in interface OpenedImageFile

Throws:

ImageIOException

dimensionsForSeries

public Dimensions dimensionsForSeries(int seriesIndex,
 Logger logger)
                               throws ImageIOException

Specified by:

dimensionsForSeries in interface OpenedImageFile

Throws:

ImageIOException

pyramid

public Optional<ImagePyramidMetadata> pyramid()
                                       throws ImageIOException

Specified by:

pyramid in interface OpenedImageFile

Throws:

ImageIOException