Package org.anchoranalysis.plugin.mpp.bean.stack.provider

Class ColoredMarks

Object

org.anchoranalysis.bean.AnchorBean<B>

org.anchoranalysis.bean.initializable.InitializableBean<T,org.anchoranalysis.image.bean.nonbean.init.ImageInitialization>

org.anchoranalysis.image.bean.ImageBean<T>

org.anchoranalysis.image.bean.provider.BeanProviderAsStackBase<org.anchoranalysis.image.bean.provider.stack.StackProvider,org.anchoranalysis.image.core.stack.Stack>

org.anchoranalysis.image.bean.provider.stack.StackProvider

org.anchoranalysis.plugin.image.bean.stack.provider.color.ColoredBase

org.anchoranalysis.plugin.image.bean.stack.provider.color.ColoredBaseWithGenerator

org.anchoranalysis.plugin.mpp.bean.stack.provider.ColoredMarks

All Implemented Interfaces:

org.anchoranalysis.bean.Provider<org.anchoranalysis.image.core.stack.Stack>, org.anchoranalysis.image.core.stack.ProviderAsStack

public class ColoredMarks
extends ColoredBaseWithGenerator

Draws a colored representation (outline or filled) of an MarkCollection on a background

Author:

Owen Feehan

Field Summary

Fields inherited from class org.anchoranalysis.plugin.image.bean.stack.provider.color.ColoredBase

DEFAULT_COLOR_SET_GENERATOR

Constructor Summary

Constructors

Constructor	Description
ColoredMarks()

Method Summary

Modifier and Type	Method	Description
org.anchoranalysis.mpp.bean.provider.MarkCollectionProvider	getMarks()
int	getRegionID()
protected org.anchoranalysis.image.voxel.object.ObjectCollection	objectsToDraw(org.anchoranalysis.image.core.dimensions.Dimensions backgroundDimensions)
void	setMarks(org.anchoranalysis.mpp.bean.provider.MarkCollectionProvider marks)
void	setRegionID(int regionID)

Methods inherited from class org.anchoranalysis.plugin.image.bean.stack.provider.color.ColoredBaseWithGenerator

coloredObjectsToDraw, getColors, setColors

Methods inherited from class org.anchoranalysis.plugin.image.bean.stack.provider.color.ColoredBase

get, getBackground, getDisplayer, getOutlineWidth, isFlatten, isOutline, isSuppressOutlineZ, setBackground, setDisplayer, setFlatten, setOutline, setOutlineWidth, setSuppressOutlineZ

Methods inherited from class org.anchoranalysis.image.bean.provider.stack.StackProvider

getAsStack

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

ColoredMarks

public ColoredMarks()

Method Details

objectsToDraw

protected org.anchoranalysis.image.voxel.object.ObjectCollection objectsToDraw(org.anchoranalysis.image.core.dimensions.Dimensions backgroundDimensions) throws org.anchoranalysis.core.exception.CreateException

Specified by:

objectsToDraw in class ColoredBaseWithGenerator

Throws:

org.anchoranalysis.core.exception.CreateException

getMarks

public org.anchoranalysis.mpp.bean.provider.MarkCollectionProvider getMarks()

setMarks

public void setMarks(org.anchoranalysis.mpp.bean.provider.MarkCollectionProvider marks)

getRegionID

public int getRegionID()

setRegionID

public void setRegionID(int regionID)