All Classes

Class Summary 
Class Description
AxisRatioEllipsoid
Calculates the axis ratio of an Ellipsoid.
CalculateEllipseLeastSquares
Calculates the best-fit ellipse for an ObjectMask using linear least squares.
CalculateEllipsoidLeastSquares
Calculates the best-fit Ellipsoid for an object using linear least squares.
ConicFitterBase
Base class for conic fitters, providing common properties and methods.
ConvexHull2D
Sets particular voxels to high only if they exist on the convex-hull of the outline of a mask.
ConvexHull3D
Calculates a 3D convex hull from a binary mask.
ConvexHullBase
Base class for convex hull implementations.
ConvexHullUtilities
Utility methods for calculating convex hulls on 2D points.
EllipseStandardFormConverter
Extracts forms for 'standard form' representation of an ellipse from the coefficients for a 2nd order polynomial describing the ellipse.
EllipsoidBase
Base class for features that calculate properties of an Ellipsoid fitted to an object.
EllipsoidFactory
Factory for creating Ellipsoid objects using least-squares fitting.
EllipsoidFitHelper
Helper class for fitting ellipsoids to point data.
Ellipsoidicity
Calculates the ellipsoidicity of an object by fitting an Ellipsoid to it.
Ellipticity
Calculates the ellipticity of an ObjectMask (on the center of gravity slice if it's a z-stack).
FitPoints
A MarkProposer that fits points to a mark using a PointsProposer and a PointsFitter.
FitPointsFromObjects
A MarkCollectionProvider that fits points from objects to create marks.
FitResult
Represents the result of fitting an ellipsoid to a set of points.
LinearLeastSquaresEllipseFitter
Fits a set of points to an ellipse using a linear least squares method.
LinearLeastSquaresEllipsoidFitter
Fits an ellipsoid to points using a linear least squares approach
LinearLeastSquaresViaNormalEquationBase
Base class for linear least squares fitting using the normal equation method.
ObjectWithEllipse
A pair containing an ObjectMask and its corresponding best-fit Ellipse.
PointsFitterToMark
A bean for fitting points to a mark using a specified points fitter.
Reference
A PointsFitter that references another PointsFitter by its ID.
ReflectInAxesWithinDistance
Reflects points in each axes if all points are within a certain distance from it
SplitContourAtSaddlePoints
Splits a 2D contour represented by an object-mask into several contours, splitting at "turn" points.