org.bdgenomics.adam.cli

FindReadsArgs

class FindReadsArgs extends Args4jBase with SparkArgs with ParquetArgs with Serializable

Linear Supertypes
Serializable, Serializable, ParquetArgs, SparkArgs, Args4jBase, AnyRef, Any
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Inherited
  1. FindReadsArgs
  2. Serializable
  3. Serializable
  4. ParquetArgs
  5. SparkArgs
  6. Args4jBase
  7. AnyRef
  8. Any
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Instance Constructors

  1. new FindReadsArgs()

Value Members

  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  2. final def !=(arg0: Any): Boolean

    Definition Classes
    Any

  3. final def ##(): Int

    Definition Classes
    AnyRef → Any

  4. final def ==(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  5. final def ==(arg0: Any): Boolean

    Definition Classes
    Any

  6. final def asInstanceOf[T0]: T0

    Definition Classes
    Any

  7. var blockSize: Int

    Definition Classes
    ParquetArgs

  8. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  9. var coalesce: Int

    Definition Classes
    SparkArgs

  10. var compressionCodec: CompressionCodecName

    Definition Classes
    ParquetArgs

  11. var disableDictionary: Boolean

    Definition Classes
    ParquetArgs

  12. var doPrintUsage: Boolean

    Definition Classes
    Args4jBase

  13. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  14. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any

  15. val file: String

  16. val filter: String

  17. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  18. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any

  19. def hashCode(): Int

    Definition Classes
    AnyRef → Any

  20. val input1Path: String

  21. val input2Path: String

  22. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any

  23. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  24. final def notify(): Unit

    Definition Classes
    AnyRef

  25. final def notifyAll(): Unit

    Definition Classes
    AnyRef

  26. var pageSize: Int

    Definition Classes
    ParquetArgs

  27. val recurse1: String

  28. val recurse2: String

  29. var repartition: Int

    Definition Classes
    SparkArgs

  30. var spark_add_stats_listener: Boolean

    Definition Classes
    SparkArgs

  31. var spark_env_vars: ArrayList[String]

    Definition Classes
    SparkArgs

  32. var spark_home: String

    Definition Classes
    SparkArgs

  33. var spark_jars: ArrayList[String]

    Definition Classes
    SparkArgs

  34. var spark_kryo_buffer_size: Int

    Definition Classes
    SparkArgs

  35. var spark_master: String

    Definition Classes
    SparkArgs

  36. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef

  37. def toString(): String

    Definition Classes
    AnyRef → Any

  38. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  39. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  40. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from Serializable

Inherited from Serializable

Inherited from ParquetArgs

Inherited from SparkArgs

Inherited from Args4jBase

Inherited from AnyRef

Inherited from Any

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