observationsPath
TransformArgs
onlyvariants
Vcf2ADAMArgs
org
root
out
SummarizeGenotypesArgs
output
PluginExecutor
outputFile
PrintADAMArgs
outputPath
ADAM2VcfArgs
AlleleCountArgs
Bam2ADAMArgs
CountKmersArgs
Fasta2ADAMArgs
Features2ADAMArgs
Reads2RefArgs
SaveFileArgs
TransformArgs
Vcf2ADAMArgs
Vcf2FlatGenotypeArgs
VcfAnnotation2ADAMArgs
ViewArgs
outputPath2
Adam2FastqArgs
outputPathArg
ViewArgs