WrapperFilter
BucketComparisons
Writable
aggregators
width
ReferenceRegion
withDefaultZeroCounts
GenotypesSummaryCounts
withMateMappedToDiffChromosome
FlagStatMetrics
withMateMappedToDiffChromosomeMapQ5
FlagStatMetrics
withSelfAndMateMapped
FlagStatMetrics
write
IndelRangeSerializer SNPRangeSerializer TreeSetSerializer AggregatedCollection UniqueWritable Writable ReadBucketSerializer ReferencePositionPairSerializer ReferencePositionSerializer ReferencePositionWithOrientationSerializer ReferenceRegionSerializer SingleReadBucketSerializer AvroSerializer Histogram
writeArray
ReadBucketSerializer SingleReadBucketSerializer
writeOptionalReferencePos
ReferencePositionPairSerializer
writer
AvroSerializer