N
Base
NonoverlappingRegions
rdd
NormalizationUtils
util
NumericSequence
TagType
name
BaseQualityScores
BucketComparisons
CombinedComparisons
DupeMismatch
MapQualityScores
MappedPosition
OverMatched
SequenceRecord
DecadentRead
named1
ComparisonTraversalEngine
named2
ComparisonTraversalEngine
names
GenomicRegionPartitioner
negativeStrand
ReferencePositionWithOrientation
newJob
HadoopUtil
next
VCFLineParser
nextLine
VCFLineParser
noCallCount
GenotypesSummaryCounts
nonReferenceConcordance
ConcordanceTable
nonReferenceDiscrepancy
ConcordanceTable
nonReferenceSensitivity
ConcordanceTable
numAlignmentBlocks
RichCigar
numElements
RichCigar
numPartitions
GenomicRegionPartitioner
numParts
GenomicRegionPartitioner
numReads
Pileup
numberOfFragmentsInContig
ADAMNucleotideContigFragmentField
numberOfPositionsToShiftIndel
NormalizationUtils