S3ByteAccess

S3FileLocator

SAMFileHeaderWritable

SAMRecordConverter

SNPRange

SNPRangeSerializer

SchemaVal

SchemaValue

SequenceDictionary

SequenceRecord

SerializableAWSCredentials

SingleReadBucket

SingleReadBucketSerializer

SmithWaterman

SmithWatermanConstantGapScoring

SmithWatermanGapScoringFromFn

SnpTable

StatisticsMap

String

sampleDescription

sampleFields

sampleId

sampleIndices

samples

samtoolsCigar

schema

schemas

scoringMatrix

secondOfPair

secondaryMapped

secretKey

seqLengths

sequence

sequenceDictionary

serialization

setHeader

setToJavaSet

shiftIndel

siftPred

siftScore

siftScoreConverted

simpleNucleotides

singleNucleotideVariantCount

singleNucleotideVariantCounts

singleReadBucketToReadBucket

singleton

singletonCount

size

slashDivided

smithwaterman

snpSet

snpSite

space

sparkContextToADAMContext

sparkContextToADAMVariationContext

species

splitBySamples

splitFromMultiAllelic

start

stream

stringToList

stringToQualitySanger

successProbability

successProbabilityToPhred