FIXED_LEN_BYTE_ARRAY
PrimitiveType
FLOAT
PrimitiveType
FORMAT_KEYS
VariantAnnotationConverter
FeatureParser
features
FieldEnumeration
projections
FieldValue
projections
FileLocator
io
Filter
projections
FilterTuple
filters
FlagStat
rdd
FlagStatMetrics
rdd
Float
TagType
Footer
rdd
failedQuality
FlagStatMetrics
failedVendorQualityChecks
ADAMRecordField
feature
BaseFeature
featureId
BaseFeature
ADAMFeatureField
featureType
ADAMFeatureField
features
rdd
fields
ParquetAggregateType
file
LocalFileLocator
filter
VCFLine
ParsedFilter
ParquetLister
IDRangeIndexGenerator
RangeIndexGenerator
MultiContigNonoverlappingRegions
filterStringRegex
BucketComparisons
filters
metrics
CombinedFilter
parquet_reimpl
find
ComparisonTraversalEngine
RegExp
findComparison
DefaultComparisons
findConsensus
ConsensusGenerator
ConsensusGeneratorFromKnowns
ConsensusGeneratorFromReads
findFiles
ADAMContext
findIndexEntries
IDRangeIndex
RangeIndex
RowGroupIndex
findOverlappingRegions
NonoverlappingRegions
findTargets
RealignmentTargetFinder
firstOfPair
ADAMRecordField
fivePrime
ReferencePosition
ReferencePositionWithOrientation
fivePrimePosition
RichADAMRecord
flowOrder
RecordGroup
flush
IDRangeIndexWriter
RangeIndexWriter
fold
ADAMFlatGenotypeReferenceFolder
ReferenceFolder
folder
IDRangeIndexGenerator
footer
ParquetFileMetadata
forMonitorMatchingTag
ValueExtractor
forMonitorValue
ValueExtractor
forTagValueWithKey
ValueExtractor
foreach
IntervalListReader
ParquetFileTraversable
PileupTraversable
format
VCFLine
parquet
formatDuration
DurationFormatting
formatFunction
TableHeader
formatHeaderLines
VariantAnnotationConverter
formatMillisecondDuration
DurationFormatting
formatNanosecondDuration
DurationFormatting
format_csv
GenotypesSummaryFormatting
format_human_readable
GenotypesSummaryFormatting
fragmentNumber
ADAMNucleotideContigFragmentField
fragmentSequence
ADAMNucleotideContigFragmentField
fragmentStartPosition
ADAMNucleotideContigFragmentField
frame
ADAMFeatureField
fromADAMContig
SequenceRecord
fromADAMContigFragment
SequenceRecord
fromADAMRecord
SequenceRecord
fromErrorProbability
QualityScore
fromSAMHeader
RecordGroupDictionary
SequenceDictionary
fromSAMReader
RecordGroupDictionary
SequenceDictionary
fromSAMSequenceDictionary
SequenceDictionary
fromSAMSequenceRecord
SequenceRecord
fromSpecificRecord
SequenceRecord