S3ByteAccess

S3FileLocator

SAMFileHeaderWritable

SAMRecordConverter

SNAPPY

SchemaVal

SchemaValue

SequenceDictionary

SequenceRecord

SerializableAWSCredentials

SerializableUnboundRecordFilter

ServoTimer

SingleReadBucket

SingleReadBucketSerializer

SmithWaterman

SmithWatermanConstantGapScoring

SmithWatermanGapScoringFromFn

SnpTable

SparkMetrics

StageIdTagKey

StageNameTagKey

StatisticsMap

String

sample

sampleDescription

sampleFields

sampleId

sampleIndices

samples

samtoolsCigar

sc

schema

schemaFields

schemaName

schemas

score

scoringMatrix

search

secondOfPair

secondaryMapped

secretKey

seqLengths

sequence

sequenceDictionary

sequencingCenter

serialization

set

setHeader

setToJavaSet

shiftIndel

siftPred

siftScore

siftScoreConverted

signalValue

simpleNucleotides

singleNucleotideVariantCount

singleNucleotideVariantCounts

singleReadBucketToReadBucket

singleton

singletonCount

size

slashDivided

smithwaterman

source

space

sparkContextToADAMContext

sparkContextToADAMFeaturesContext

sparkContextToADAMVariationContext

species

splitBySamples

splitFromMultiAllelic

stageId

start

strand

stream

stringToList

stringToQualitySanger

stringifyRange

successProbability

successProbabilityToPhred

suffix

suffixSearch