C I O S

## C

createRecordReader(InputSplit, TaskAttemptContext) - Method in class org.bdgenomics.adam.io.InterleavedFastqInputFormat
  Creates the new record reader that underlies this input format.
createRecordReader(InputSplit, TaskAttemptContext) - Method in class org.bdgenomics.adam.io.SingleFastqInputFormat
  Creates the new record reader that underlies this input format.

## I

InterleavedFastqInputFormat - Class in org.bdgenomics.adam.io
  This class is a Hadoop reader for "interleaved fastq" -- that is, fastq with paired reads in the same file, interleaved, rather than in two separate files.
InterleavedFastqInputFormat() - Constructor for class org.bdgenomics.adam.io.InterleavedFastqInputFormat
isSplitable(JobContext, Path) - Method in class org.bdgenomics.adam.io.InterleavedFastqInputFormat
  For now, we do not support splittable compression codecs.
isSplitable(JobContext, Path) - Method in class org.bdgenomics.adam.io.SingleFastqInputFormat
  For now, we do not support splittable compression codecs.

## O

org.bdgenomics.adam.io - package org.bdgenomics.adam.io

## S

SingleFastqInputFormat - Class in org.bdgenomics.adam.io
  This class is a Hadoop reader for single read fastq.
SingleFastqInputFormat() - Constructor for class org.bdgenomics.adam.io.SingleFastqInputFormat

C I O S

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