org.bdgenomics.adam.projections

# AlignmentRecordField

###
Related Doc: package projections

#### object AlignmentRecordField extends FieldEnumeration

Enumeration of AlignmentRecord field names for predicates and projections.

Linear Supertypes
FieldEnumeration, Enumeration, Serializable, Serializable, AnyRef, Any
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Inherited

1. AlignmentRecordField
2. FieldEnumeration
3. Enumeration
4. Serializable
5. Serializable
6. AnyRef
7. Any

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Visibility

1. Public
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### Type Members

1. #### class SchemaVal extends Val with FieldValue

   An enumerated field that is part of this schema.

   An enumerated field that is part of this schema.

   Definition Classes
     FieldEnumeration

2. #### class Val extends Value with Serializable

   Attributes
     protected
   Definition Classes
     Enumeration
   Annotations
     @SerialVersionUID()

3. #### abstract class Value extends Ordered[Value] with Serializable

   Definition Classes
     Enumeration
   Annotations
     @SerialVersionUID()

4. #### class ValueSet extends AbstractSet[Value] with SortedSet[Value] with SortedSetLike[Value, ValueSet] with Serializable

   Definition Classes
     Enumeration

### Value Members

1. #### final def !=(arg0: Any): Boolean

   Definition Classes
     AnyRef → Any

2. #### final def ##(): Int

   Definition Classes
     AnyRef → Any

3. #### final def ==(arg0: Any): Boolean

   Definition Classes
     AnyRef → Any

4. #### final def SchemaValue: SchemaVal

   Attributes
     protected
   Definition Classes
     FieldEnumeration

5. #### final def Value(i: Int, name: String): Value

   Attributes
     protected
   Definition Classes
     Enumeration

6. #### final def Value(name: String): Value

   Attributes
     protected
   Definition Classes
     Enumeration

7. #### final def Value(i: Int): Value

   Attributes
     protected
   Definition Classes
     Enumeration

8. #### final def Value: Value

   Attributes
     protected
   Definition Classes
     Enumeration

9. #### final def apply(x: Int): Value

   Definition Classes
     Enumeration

10. #### final def asInstanceOf[T0]: T0

    Definition Classes
      Any

11. #### val attributes: SchemaVal

12. #### val basesTrimmedFromEnd: SchemaVal

13. #### val basesTrimmedFromStart: SchemaVal

14. #### val cigar: SchemaVal

15. #### def clone(): AnyRef

    Attributes
      protected[java.lang]
    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

16. #### val contigName: SchemaVal

17. #### val duplicateRead: SchemaVal

18. #### val end: SchemaVal

19. #### final def eq(arg0: AnyRef): Boolean

    Definition Classes
      AnyRef

20. #### def equals(arg0: Any): Boolean

    Definition Classes
      AnyRef → Any

21. #### val failedVendorQualityChecks: SchemaVal

22. #### def finalize(): Unit

    Attributes
      protected[java.lang]
    Definition Classes
      AnyRef
    Annotations
      @throws( classOf[java.lang.Throwable] )

23. #### final def getClass(): Class[_]

    Definition Classes
      AnyRef → Any

24. #### def hashCode(): Int

    Definition Classes
      AnyRef → Any

25. #### val inferredInsertSize: SchemaVal

26. #### final def isInstanceOf[T0]: Boolean

    Definition Classes
      Any

27. #### val mapq: SchemaVal

28. #### val mateAlignmentEnd: SchemaVal

29. #### val mateAlignmentStart: SchemaVal

30. #### val mateContigName: SchemaVal

31. #### val mateMapped: SchemaVal

32. #### val mateNegativeStrand: SchemaVal

33. #### final def maxId: Int

    Definition Classes
      Enumeration

34. #### val mismatchingPositions: SchemaVal

35. #### final def ne(arg0: AnyRef): Boolean

    Definition Classes
      AnyRef

36. #### var nextId: Int

    Attributes
      protected
    Definition Classes
      Enumeration

37. #### var nextName: Iterator[String]

    Attributes
      protected
    Definition Classes
      Enumeration

38. #### final def notify(): Unit

    Definition Classes
      AnyRef

39. #### final def notifyAll(): Unit

    Definition Classes
      AnyRef

40. #### val oldCigar: SchemaVal

41. #### val oldPosition: SchemaVal

42. #### val origQual: SchemaVal

43. #### val primaryAlignment: SchemaVal

44. #### val properPair: SchemaVal

45. #### val qual: SchemaVal

46. #### val readInFragment: SchemaVal

47. #### val readMapped: SchemaVal

48. #### val readName: SchemaVal

49. #### val readNegativeStrand: SchemaVal

50. #### val readPaired: SchemaVal

51. #### def readResolve(): AnyRef

    Attributes
      protected
    Definition Classes
      Enumeration

52. #### val recordGroupName: SchemaVal

53. #### val recordGroupSample: SchemaVal

54. #### val recordSchema: Schema

    The schema that this enumeration represents.

    The schema that this enumeration represents.

    Definition Classes
      FieldEnumeration

55. #### val secondaryAlignment: SchemaVal

56. #### val sequence: SchemaVal

57. #### val start: SchemaVal

58. #### val supplementaryAlignment: SchemaVal

59. #### final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
      AnyRef

60. #### def toString(): String

    Definition Classes
      Enumeration → AnyRef → Any

61. #### def values: ValueSet

    Definition Classes
      Enumeration

62. #### final def wait(): Unit

    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

63. #### final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

64. #### final def wait(arg0: Long): Unit

    Definition Classes
      AnyRef
    Annotations
      @throws( ... )

65. #### final def withName(s: String): Value

    Definition Classes
      Enumeration

### Inherited from FieldEnumeration

### Inherited from Enumeration

### Inherited from Serializable

### Inherited from AnyRef

### Inherited from Any

### Ungrouped