org.bdgenomics.adam.rdd.read

# ReadDataset

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Related Docs: class ReadDataset | package read

#### object ReadDataset

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4. #### def apply(rdd: RDD[Read], sd: SequenceDictionary): ReadDataset

   Builds a ReadDataset given a sequence dictionary.

   Builds a ReadDataset given a sequence dictionary.

   rdd

     The underlying Read RDD to build from.

   sd

     The sequence dictionary for this ReadDataset.

   returns

     Returns a new ReadDataset.

5. #### def apply(rdd: RDD[Read]): ReadDataset

   Builds a ReadDataset with an empty sequence dictionary.

   Builds a ReadDataset with an empty sequence dictionary.

   rdd

     The underlying Read RDD to build from.

   returns

     Returns a new ReadDataset.

6. #### def apply(ds: Dataset[Read], sequences: SequenceDictionary): ReadDataset

   A genomic dataset that wraps a dataset of Read data.

   A genomic dataset that wraps a dataset of Read data.

   ds

     A Dataset of genomic Reads.

   sequences

     The reference genome these data are aligned to.

7. #### def apply(ds: Dataset[Read]): ReadDataset

   A genomic dataset that wraps a dataset of Read data.

   A genomic dataset that wraps a dataset of Read data.

   ds

     A Dataset of genomic Reads.

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