org.bdgenomics.adam.rdd

# sequence

#### package sequence

Visibility

1. Public
2. All

### Type Members

1. #### case class DatasetBoundSequenceDataset extends SequenceDataset with DatasetBoundGenomicDataset[Sequence, Sequence, SequenceDataset] with Product with Serializable

2. #### case class DatasetBoundSliceDataset extends SliceDataset with DatasetBoundGenomicDataset[Slice, Slice, SliceDataset] with Product with Serializable

3. #### class FASTAInFormatter extends InFormatter[Sequence, Sequence, SequenceDataset, FASTAInFormatter]

4. #### case class ParquetUnboundSequenceDataset extends SequenceDataset with Product with Serializable

5. #### case class ParquetUnboundSliceDataset extends SliceDataset with Product with Serializable

6. #### case class RDDBoundSequenceDataset extends SequenceDataset with Product with Serializable

7. #### case class RDDBoundSliceDataset extends SliceDataset with Product with Serializable

8. #### sealed abstract class SequenceDataset extends AvroGenomicDataset[Sequence, Sequence, SequenceDataset]

9. #### sealed abstract class SliceDataset extends AvroGenomicDataset[Slice, Slice, SliceDataset]

### Value Members

1. #### object FASTAInFormatter extends InFormatterCompanion[Sequence, Sequence, SequenceDataset, FASTAInFormatter] with Serializable

   InFormatter companion that creates an InFormatter that writes FASTA.

2. #### object SequenceDataset

3. #### object SliceDataset

### Ungrouped