LengthNormalization
normalization
LoadAlignmentRecords
Timers
LocusPredicate
predicates
LongComparisons
metrics
leftAlignIndel
NormalizationUtils
length
ReferenceRegion SequenceRecord
lengths
GenomicPositionPartitioner
library
RecordGroup
liftOverFromReference
ReferencePositionWithOrientation
liftOverToReference
ReferencePositionWithOrientation
listToJavaList
ADAMContext ImplicitJavaConversions
listToString
VcfStringUtils
loadAlignments
ADAMContext
loadAlignmentsFromPaths
ADAMContext
loadFeatures
ADAMContext
loadGenes
ADAMContext
loadGenotypes
ADAMContext
loadSequence
ADAMContext
loadVariantAnnotations
ADAMContext
loadVariants
ADAMContext
lookup
RecalibrationTable
lt
TargetOrdering