org.bdgenomics.adam.algorithms.prefixtrie

DNAPrefixTrie

object DNAPrefixTrie extends Serializable

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  6. def apply[V](init: Map[String, V]): DNAPrefixTrie[V]

    Creates a fixed depth prefix trie, and populates it with a set of key->value mappings.

    Creates a fixed depth prefix trie, and populates it with a set of key->value mappings. Keys containing ambiguous bases are not added to the collection.

    V

    The type of the values stored in the trie.

    init

    A map specifying key->value mappings. Used for populating the initial trie.

    returns

    Returns a populated trie.

    Exceptions thrown
    AssertionError

    An assertion error is thrown if the length of the keys provided varies or if the input is an empty map.

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