org.bdgenomics.adam.predicates

ADAMPredicate

trait ADAMPredicate[T] extends UnboundRecordFilter

ADAMPredicate: Classes derived from ADAMPredicate can be used to set ParquetInputFormat.setUnboundRecordFilter for predicate pushdown, or alternatively, filter an already loaded RDD

Linear Supertypes
UnboundRecordFilter, AnyRef, Any
Known Subclasses
GenotypeRecordPASSPredicate, HighQualityReadPredicate, UniqueMappedReadPredicate
Ordering
  1. Alphabetic
  2. By inheritance
Inherited
  1. ADAMPredicate
  2. UnboundRecordFilter
  3. AnyRef
  4. Any
  1. Hide All
  2. Show all
Learn more about member selection
Visibility
  1. Public
  2. All

Abstract Value Members

  1. abstract val recordCondition: RecordCondition[T]

Concrete Value Members

  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  2. final def !=(arg0: Any): Boolean

    Definition Classes
    Any

  3. final def ##(): Int

    Definition Classes
    AnyRef → Any

  4. final def ==(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  5. final def ==(arg0: Any): Boolean

    Definition Classes
    Any

  6. final def apply(rdd: RDD[T]): RDD[T]

  7. final def asInstanceOf[T0]: T0

    Definition Classes
    Any

  8. def bind(readers: Iterable[ColumnReader]): RecordFilter

    Definition Classes
    ADAMPredicate → UnboundRecordFilter

  9. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  10. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  11. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any

  12. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  13. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any

  14. def hashCode(): Int

    Definition Classes
    AnyRef → Any

  15. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any

  16. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  17. final def notify(): Unit

    Definition Classes
    AnyRef

  18. final def notifyAll(): Unit

    Definition Classes
    AnyRef

  19. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef

  20. def toString(): String

    Definition Classes
    AnyRef → Any

  21. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  22. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  23. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from UnboundRecordFilter

Inherited from AnyRef

Inherited from Any

Ungrouped