org.bdgenomics.adam.models

# RecordGroupDictionary

#### class RecordGroupDictionary extends Serializable

Builds a dictionary containing record groups. Record groups must have a unique name across all samples in the dictionary. This dictionary provides numerical IDs for each group; these IDs are only consistent when referencing a single dictionary.

Exceptions thrown
  AssertionError

  Throws an assertion error if there are multiple record groups with the same name.

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### Instance Constructors

1. #### new RecordGroupDictionary(recordGroups: Seq[RecordGroup])

   recordGroups

     A seq of record groups to popualate the dictionary.

   Exceptions thrown
     AssertionError

     Throws an assertion error if there are multiple record groups with the same name.

### Value Members

1. #### final def !=(arg0: AnyRef): Boolean

   Definition Classes
     AnyRef

2. #### final def !=(arg0: Any): Boolean

   Definition Classes
     Any

3. #### final def ##(): Int

   Definition Classes
     AnyRef → Any

4. #### def ++(that: RecordGroupDictionary): RecordGroupDictionary

5. #### final def ==(arg0: AnyRef): Boolean

   Definition Classes
     AnyRef

6. #### final def ==(arg0: Any): Boolean

   Definition Classes
     Any

7. #### def apply(recordGroupName: String): RecordGroup

   Returns the record group entry for an associated name.

   Returns the record group entry for an associated name.

   recordGroupName

     The record group to look up.

   returns

     Detailed info for a record group.

8. #### final def asInstanceOf[T0]: T0

   Definition Classes
     Any

9. #### def clone(): AnyRef

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     protected[java.lang]
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     @throws( ... )

10. #### final def eq(arg0: AnyRef): Boolean

    Definition Classes
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11. #### def equals(arg0: Any): Boolean

    Definition Classes
      AnyRef → Any

12. #### def finalize(): Unit

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      protected[java.lang]
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    Annotations
      @throws( classOf[java.lang.Throwable] )

13. #### final def getClass(): Class[_]

    Definition Classes
      AnyRef → Any

14. #### def getIndex(recordGroupName: String): Int

    Returns the numerical index for a given record group name.

    Returns the numerical index for a given record group name.

    recordGroupName

      The record group to find an index for.

    returns

      Returns a numerical index for a record group.

    Note

      This index is only guaranteed to have the same value for a given record group name when the index is pulled from the same record group dictionary.

15. #### def hashCode(): Int

    Definition Classes
      AnyRef → Any

16. #### final def isInstanceOf[T0]: Boolean

    Definition Classes
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17. #### final def ne(arg0: AnyRef): Boolean

    Definition Classes
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18. #### final def notify(): Unit

    Definition Classes
      AnyRef

19. #### final def notifyAll(): Unit

    Definition Classes
      AnyRef

20. #### lazy val recordGroupMap: Map[String, (RecordGroup, Int)]

21. #### val recordGroups: Seq[RecordGroup]

    A seq of record groups to popualate the dictionary.

22. #### final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
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23. #### def toString(): String

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24. #### final def wait(): Unit

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      @throws( ... )

25. #### final def wait(arg0: Long, arg1: Int): Unit

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26. #### final def wait(arg0: Long): Unit

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### Inherited from Serializable

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